Pairwise Alignments

Query, 344 a.a., iron(III) ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) from Escherichia coli BW25113

 Score = 54.7 bits (130), Expect = 3e-12
 Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 20/207 (9%)

Query: 117 PAKRKGNYSSAVYMGILGFGVNTERLAQKGIPIPRCWADLTKPEYKGEIQISDPQSS--- 173
           P     +YS     G    GVN + +  K +     WADL KPEYKG + ++D       
Sbjct: 118 PFDPNNDYSIPYIWGATAIGVNGDAVDPKSVT---SWADLWKPEYKGSLLLTDDAREVFQ 174

Query: 174 ----GTAYTALATFIQLWDEPTAFEYFKKLDKNVSQYTKSGVTPSRNSARGEVAIGIGFL 229
                  Y+   T  +  +   A+   KKL  NV+ +      P+     GEV +G+ + 
Sbjct: 175 MALRKLGYSGNTTDPK--EIEAAYNELKKLMPNVAAFNSD--NPANPYMEGEVNLGMIWN 230

Query: 230 HDYSLEQAKGAPLELISPCEGTGYELGGVSIIKGARNLDNAKLFVDWVLSKEGQEVAWKQ 289
               + +  G P++++ P EG  + +  ++I   A+N + A   ++++L     +VA + 
Sbjct: 231 GSAFVARQAGTPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLR---PDVAKQV 287

Query: 290 GDSYQILTNTQAEQ---SPNALDPKTL 313
            ++    T   A +   SP   + KTL
Sbjct: 288 AETIGYPTPNLAARKLLSPEVANDKTL 314