Pairwise Alignments

Query, 344 a.a., iron(III) ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 47.8 bits (112), Expect = 5e-10
 Identities = 68/304 (22%), Positives = 127/304 (41%), Gaps = 14/304 (4%)

Query: 27  EGRLVVYCSATNAMCEAGTKAFAEKYNVNTSFVRNGSGSTLAKID-AEKNNPRADVWYGG 85
           E R+VV  S  + + +   +AF E+ N  T        S  A ++ A+ +    DV++  
Sbjct: 28  EDRVVVMTSYPDELVQRYEQAF-ERANPGTDLQVVWKPSRDAAVELAKPDQGGVDVYWTP 86

Query: 86  TLDPQSQAGEMDLLQ--AYQSPELANIMEGFRDPAKRKGNYSSAVYMGILGFGVNTERLA 143
           +L    +  +    +  A     L  +++G +  + R+G + +    G  G  VN   LA
Sbjct: 87  SLSSFPRLRDAGAFRSLAVDRAVLPGVVDG-QFVSDRRGFFEAFEVAGY-GLIVNPAALA 144

Query: 144 QKGIPIPRCWADLTKPEYKGEIQISDPQSSGTAYTALATFIQLWDEPTAFEYFKKLDKNV 203
           +  +P P  W DL    + G++ +      G +       +Q       +    +   + 
Sbjct: 145 RDRLPQPATWRDLAATRWTGQLALPIAGQVGFSGALYDILLQAEGWEAGWALLGEAAADA 204

Query: 204 SQYTKSG-VTPSRNSARGEVAIGIGFLHDYSLEQAKGAPLELISPCEGTGYELGGVSIIK 262
           +     G V+ S  +   +VA+ + F    ++  A G P+ L+ P   T +    V+I +
Sbjct: 205 TLVGSGGQVSESVVNGEADVAVTVDFFARSAI--ANGHPVALVYPPR-TAFLPAQVAITR 261

Query: 263 GARNLDNAKLFVDWVLSKEGQEVAWKQG-DSYQILTNTQAEQSPNALDP---KTLKLINY 318
            A + D A+ FVD+VLS  GQ + +      Y +  +  A+     ++P      +   Y
Sbjct: 262 AAPHPDAARAFVDFVLSAPGQALLFHPDIRRYPVRPDVYAQAPAGTVNPFQRVGAEPYAY 321

Query: 319 DMET 322
           DMET
Sbjct: 322 DMET 325