Pairwise Alignments

Query, 436 a.a., MFS transporter family glucose-6-phosphate receptor UhpC from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., D-galacturonate transporter (MFS superfamily) (from data) from Pseudomonas simiae WCS417

 Score =  111 bits (277), Expect = 5e-29
 Identities = 102/427 (23%), Positives = 185/427 (43%), Gaps = 39/427 (9%)

Query: 21  HWRIHLMISMYVGYGVFYLTRKSFNFAMPQMLSELGLDYSDLGFLSTLFYLTYGVSKFVS 80
           H R  +++ +++   + Y  R +   A   +  +LG+D   LG++ + F   Y   +   
Sbjct: 8   HVRYLILLMLFLVTTINYADRATIAIAGSSLQKDLGIDAVTLGYIFSAFGWAYVAGQIPG 67

Query: 81  GLMIDRSRSPYFMGLGLMATGIINIA------FGFSSSLLAFTLLWTANAFFQGWGWPAC 134
           G ++DR  S     L +    +  +       FG S++++A  +L       +   +P  
Sbjct: 68  GWLLDRFGSKKVYALSIFTWSLFTVLQGYVGEFGVSTAVVALFMLRFMVGLAEAPSFPGN 127

Query: 135 AKVLTHWYSRSERGFWWSIWNTCHNLSGALIPIVIGFISLTFGWRYGFLFAGGVAIFVGL 194
           A+++  W+  +ERG   +I+N+    +  L   ++G+I  +FGW++ F+  G + I   L
Sbjct: 128 ARIVAAWFPTAERGTASAIFNSAQYFATVLFAPLMGWIVYSFGWQHVFIVMGVIGIIFSL 187

Query: 195 -WLCYRIQEKPSEMGLPSVGEW-----RGDALELEHEKEGQGLAFRVAVYRYV---LTNR 245
            WL  ++   P +  + +  E+      G  ++++ +K G+G       + Y+   LTNR
Sbjct: 188 IWL--KVIHSPRQHPMINEAEFNHIAANGAMVDMDQDK-GKGKKTDGPKWDYIRQLLTNR 244

Query: 246 YIWLLCGSYLLVYVVRIGIN----DWGSLYLVERHAYNILSANSAVAMFEVGGFLGSLLG 301
              ++ G YL  Y +  GI      W  +YLV+     IL A    ++  + GF+G +LG
Sbjct: 245 ---MMLGVYLGQYCIN-GITYFFLTWFPVYLVQDRGMTILKAGFIASLPAICGFIGGVLG 300

Query: 302 GWGSDYYFRGNRAPMNLIFAL------GIFASVAALWLTPIDHLWFLAGCFFCIGFFVFG 355
           G  SDY  R      +L FA       G+  S + +    +D  W + G F  + FF  G
Sbjct: 301 GVISDYLLRKGH---SLTFARKAPIIGGLLISSSIVACNYVDIEWMVVG-FMALAFFGKG 356

Query: 356 PQMMIGMAAAECARKDLAGTATGFVGLFSYLGAALASYPMSLAIEAWG---WEGFFCLIT 412
              +     ++ + K +AG + G    F  L +      +   I   G   W   F    
Sbjct: 357 VGALGWAVVSDTSPKQIAGLSGGLFNTFGNLASITTPIVIGYIISTTGSFKWALVFVGAN 416

Query: 413 AAAAVIS 419
           A  AV S
Sbjct: 417 ALVAVFS 423



 Score = 24.6 bits (52), Expect = 0.007
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 374 GTATGFVGLFSYLGAALASYPMSLAIEAWGWEGFFCLITAAAAVISLQLLPFIKA--QQP 431
           GTA+       Y    L +  M   + ++GW+  F ++     + SL  L  I +  Q P
Sbjct: 141 GTASAIFNSAQYFATVLFAPLMGWIVYSFGWQHVFIVMGVIGIIFSLIWLKVIHSPRQHP 200

Query: 432 VTED 435
           +  +
Sbjct: 201 MINE 204