Pairwise Alignments

Query, 527 a.a., signal transduction histidine-protein kinase/phosphatase UhpB from Vibrio cholerae E7946 ATCC 55056

Subject, 513 a.a., MASE1 sensor histidine kinase from Escherichia coli ECRC102

 Score =  368 bits (944), Expect = e-106
 Identities = 216/518 (41%), Positives = 318/518 (61%), Gaps = 33/518 (6%)

Query: 7   LIFAFVLYSISQFSLWNVSQYLSHNPLQAYLLFPTGLRLA-VYLLAR---------PTYV 56
           L+F  + +      LW +S YL++N  QA L  P G+ LA V LL+R         P  +
Sbjct: 11  LLFIVLAWGTGWLMLWTLSFYLTNNGQQAVLFLPQGVYLALVILLSRRYWPALVLPPLLM 70

Query: 57  WVWLLSDMLLAGVILVLLPDQSSPLMLLMPWVVWLAAVIARQHWPKLHLYWQKLLLIVAL 116
             WL S+ LL G +++     ++P++ L P      A++A+  W +  LYWQ+L L++A 
Sbjct: 71  MFWLHSEQLLNGYLML-----ATPVISLFP------ALLAQNFWHRFPLYWQRLTLLLAT 119

Query: 117 VLLHTILVGITFTLLAKPLHMGAETLIAVSIASLTGGIVLTPFLYLVADYLSHQTWHPLS 176
           V   ++L     T L  P   G   ++   + S TGG++LTPF+YL+ ++L  Q  + L 
Sbjct: 120 VTAASLLN----TALLSPFMSGP--IMLPGLTSFTGGVLLTPFVYLIFEFLRQQHRYQLL 173

Query: 177 PQLIHHDVKLKPKMLMWSLLFFSLGLLAELTLLEQMKPFALLIILLPTIFLAYRYGWQGG 236
             L  H+  L+  +++W  LFF +G+  ++ L  +++   L+++ LP + +A+++GWQGG
Sbjct: 174 G-LDTHNPPLRTSLIIWCSLFFIIGIGTQMVLSPEIERLLLIVVFLPNVVMAWKFGWQGG 232

Query: 237 VLASSLNCILLATARQFSGSFSSDQELLIFMSSQAFVGLGLGIAISRQHQLALLLQKMNT 296
           VL+  L  +++  ARQ    FS+  EL IF+++QA +G+GLGIAISRQ  LAL L     
Sbjct: 233 VLSGLLGSMMITIARQIGVGFSNLVELEIFLATQALLGIGLGIAISRQQHLALNLHHYRQ 292

Query: 297 RLAKELREKQDLARQLVSVEEQIRKSVARELHDEIGQNITAIQIQSMLAERLASNDQAKQ 356
           RL  EL  ++ LA +L+  EE  RK++ARELHDEIGQNITAIQIQS L +R     Q + 
Sbjct: 293 RLEAELAARRALAEKLIHTEEDTRKNLARELHDEIGQNITAIQIQSQLVKRARDPAQIQS 352

Query: 357 AASSVQSLAMRIHQSTRQLLKQLRPHILDELGLEHAIRQLVQEMRFAEQGMTVRLNMGVN 416
           AAS +  LA RIH STRQLL+QLRP  LDEL    A+  L+ E  F+E+G+  +    +N
Sbjct: 353 AASQINELARRIHLSTRQLLRQLRPPALDELTFREALLHLINEFAFSERGIHCQFAYQLN 412

Query: 417 PQKLDDTTRVTLYRIVQELLNNICKHAKATRVHISLFPGSEMV-LEVKDDGIGLPTDWRV 475
               ++T R TLYR++QELLNNICKHA+A+ V I L    E++ LEV D+G+G+ +  ++
Sbjct: 413 STPENETVRFTLYRLLQELLNNICKHAEASEVTIILRQQGEVLHLEVSDNGVGIASG-KM 471

Query: 476 RGHGLKGLSERVSALGGQLKMTSSTFQTGTRIIVNLPT 513
            G G++G+ ERVSALGG L +     Q GTR+IVNLPT
Sbjct: 472 AGFGIQGMRERVSALGGDLTLEK---QHGTRVIVNLPT 506