Pairwise Alignments

Query, 527 a.a., signal transduction histidine-protein kinase/phosphatase UhpB from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., Oxygen sensor histidine kinase NreB from Alteromonas macleodii MIT1002

 Score =  125 bits (314), Expect = 4e-33
 Identities = 129/504 (25%), Positives = 216/504 (42%), Gaps = 60/504 (11%)

Query: 40  PTGLRLAVYLLARPTYVWVWLLSDMLLAGVILVL---LPDQSSPL----------MLLMP 86
           P G+RLA +LL  P Y W  LL    L   IL     + D ++ L          ++L P
Sbjct: 44  PAGVRLAAFLLL-PIYSWPLLLIAEKLTHFILFHPGGILDNTAFLSGTIGWYLVHLVLSP 102

Query: 87  WVVWLAAVIARQHW--PKLHLYWQKLLLIVALVLLHTILVGITFTLLAKPLHMGAETLIA 144
            V+     + R+ +  P +      L  +   VL+   L  +     A  L  G E  ++
Sbjct: 103 AVICTCVYLFRRRFSAPYIDNVSSTLATLAFGVLISVALGAVFLGRRAIELQTGIEVFLS 162

Query: 145 V----SIASLTGGIVLTPFLYLVADYLSHQTWHPLSPQLIHHDVKLKPKMLMWSLLFF-- 198
           +    S+    G +VL PFL+ +             P +    + L    + W +L    
Sbjct: 163 ILFDFSLGDFVGIVVLCPFLFALYK----------RPSIPKSHLALYLTTIAWLVLLILS 212

Query: 199 SLGLLAELTLLEQMKPFALLIILLPTIFLAYRYGWQGGVLASSLNCILLATARQFSGSFS 258
           S     ++ +  Q+K  A+     P +FL+YRY     ++ S+ +C+L+        S S
Sbjct: 213 SYAYSQQINISYQVKYLAVF----PALFLSYRYA----IVGSAFSCLLIGITAFVVASQS 264

Query: 259 S----DQELLIFMSSQAFVGLGLGIAISRQHQLALLLQKMNTRLAKELREKQDLARQLVS 314
           +    + +  I  S  +   L LG +I++   L + L K N  L   ++  Q LA QLV 
Sbjct: 265 ALPPIEHQFYILASCTSC--LILGASINQSTLLNMKLAKKNEALELSVQSAQALASQLVV 322

Query: 315 VEEQIRKSVARELHDEIGQNITAIQIQSMLAERLASNDQAKQAASSVQSLAMRIHQSTRQ 374
           V+E  RK ++R+LHD+ G  I  +++Q  L  R + ND       +       ++ + ++
Sbjct: 323 VQEDERKRLSRDLHDDFGHRIVDLKLQLSLDSRESDNDMMLNKIDA-------LYHAMKK 375

Query: 375 LLKQLRPHILDELGLEHAIRQLVQEMRFAEQGMTVRLNMGVNPQKLDDTTRVTLYRIVQE 434
            L  LRP  +D L +E  I++           +    N+   P   D   ++ +YRIVQE
Sbjct: 376 SLGGLRPSGIDTLPIESVIQRSEIITTLKRANIDYSFNVSGTPVPFDSDQKIHIYRIVQE 435

Query: 435 LLNNICKHAKATRVHISL-FPGSEMVLEVKDDGIGLPTDWRVRGH-----GLKGLSERVS 488
            + N  K+A AT + I + +     V  V DDG G+P       +     GL  + ER  
Sbjct: 436 AVTNSIKYANATSLSIDINYAQHSAVFTVTDDGGGIPEHIAQLANAEPTLGLLSMRERAK 495

Query: 489 ALGGQLKMTSSTFQTGTRIIVNLP 512
            + G+  + S    +GTR+ + LP
Sbjct: 496 LINGEFDI-SQNKPSGTRVCLALP 518