Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., Transcriptional activator protein ExaE from Pseudomonas putida KT2440

 Score =  119 bits (297), Expect = 5e-32
 Identities = 67/203 (33%), Positives = 112/203 (55%), Gaps = 4/203 (1%)

Query: 2   ITIALVDDHTIVRSGFAQLLNLEQDIRVQGEYESAKAAFYALTQAEVDVAIIDISMPDEN 61
           + I LVDDH +VR G+A LL     +    E  S + A   + +   ++ I+D  +P  +
Sbjct: 1   MNIVLVDDHAVVRQGYASLLRAVLPLVQVREAASGEEALVRVQEQVPNLVIMDFGLPGIS 60

Query: 62  GLSLLERLRQHNPRFKAIILSIYDSASFVKKALDAGAQGYLSKRCGPSELVSAIRTVASG 121
           GL    RLRQ  P+ + +  S++D    V++ALDAGA GYL+K   P  L+ A++ V +G
Sbjct: 61  GLETTRRLRQRLPQLRVLFFSMHDELPLVRQALDAGASGYLTKNSAPEVLIEAVQRVLAG 120

Query: 122 RRYL---CADALVNLSNPDINNV-LADLTKREVEVFDLLVQGKEVKEIAQTLFLSHKTVH 177
             Y+    A  L  LS    ++  L  +T+RE+E+F +L +G   + IA+ L +S KTV 
Sbjct: 121 HAYIEQPLATQLACLSQQSTSDPRLQRMTQRELEIFTMLAKGTPARVIAEQLCISAKTVS 180

Query: 178 VHRANILSKLNLTNNVDVIRFAL 200
            H   + SKL ++++ +++   +
Sbjct: 181 NHLTLLKSKLQVSSHAELVHLGI 203