Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., DNA-binding response regulator UhpA from Pseudomonas putida KT2440

 Score =  141 bits (355), Expect = 1e-38
 Identities = 77/209 (36%), Positives = 125/209 (59%), Gaps = 4/209 (1%)

Query: 1   MITIALVDDHTIVRSGFAQLLNLEQDIRVQGEYESAKAAFYALTQAEVDVAIIDISMPDE 60
           MI + + +DHTIVR G  QL+ L +D++V GE  + +     L     +V ++DISMP  
Sbjct: 1   MIRVLVAEDHTIVREGIKQLIGLAKDMQVAGEAGNGEQLLETLRHTPCEVVLLDISMPGV 60

Query: 61  NGLSLLERLRQHNPRFKAIILSIYDSASFVKKALDAGAQGYLSKRCGPSELVSAIRTVAS 120
           NGL  + R+R  +     ++LS++D A    +AL AGA GY +K   P+ L++AIR VA 
Sbjct: 61  NGLEAIPRIRALHDAPAILMLSMHDEAQMAARALKAGAAGYATKDSDPALLLTAIRRVAG 120

Query: 121 GRRYL---CADALV-NLSNPDINNVLADLTKREVEVFDLLVQGKEVKEIAQTLFLSHKTV 176
           G RY+    AD +V  +   +   +   L++RE  VF+ L QG  V +IAQ L LS KT+
Sbjct: 121 GGRYIDPSLADRMVFEVGLTESRPLHTLLSEREFSVFERLAQGANVNDIAQQLALSSKTI 180

Query: 177 HVHRANILSKLNLTNNVDVIRFALQHQLL 205
             H+A ++ KL + +  +++++A++H+L+
Sbjct: 181 STHKARLMQKLKVNSLAELVKYAMEHKLI 209