Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 218 a.a., response regulator (NCBI) from Escherichia coli BW25113

 Score =  133 bits (335), Expect = 2e-36
 Identities = 75/209 (35%), Positives = 122/209 (58%), Gaps = 5/209 (2%)

Query: 1   MITIALVDDHTIVRSGFAQLLNLEQDIRVQGEYESAKAAFYALTQAEVDVAIIDISMPDE 60
           MI + LVDDH +VR+G  ++L   + I+V GE    + A        VDV ++D+SMP  
Sbjct: 1   MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI 60

Query: 61  NGLSLLERLRQHNPRFKAIILSIYDSASFVKKALDAGAQGYLSKRCGPSELVSAIRTVAS 120
            GL    ++ +     K I+L+++       K + AGA GYLSK   P E+VSAIR+V S
Sbjct: 61  GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS 120

Query: 121 GRRYLCAD-----ALVNLSNPDINNVLADLTKREVEVFDLLVQGKEVKEIAQTLFLSHKT 175
           G+RY+ +D     AL  +      +  A L++RE+++  ++ +G++V EI++ L LS KT
Sbjct: 121 GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT 180

Query: 176 VHVHRANILSKLNLTNNVDVIRFALQHQL 204
           V+ +R  + SKLN+  +V++   A++H L
Sbjct: 181 VNSYRYRMFSKLNIHGDVELTHLAIRHGL 209