Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., UvrY/SirA/GacA family response regulator transcription factor from Erwinia tracheiphila SCR3

 Score =  130 bits (327), Expect = 2e-35
 Identities = 72/210 (34%), Positives = 123/210 (58%), Gaps = 5/210 (2%)

Query: 1   MITIALVDDHTIVRSGFAQLLNLEQDIRVQGEYESAKAAFYALTQAEVDVAIIDISMPDE 60
           MI++ LVDDH +VR+G  ++L   +  +V GE    + A        V V ++D++MP  
Sbjct: 1   MISVLLVDDHELVRAGIRRILEDIKGFQVVGEVNCGEDAVKWCRTNPVSVVLMDMNMPGI 60

Query: 61  NGLSLLERLRQHNPRFKAIILSIYDSASFVKKALDAGAQGYLSKRCGPSELVSAIRTVAS 120
            GL    ++ ++NP  K I+L+I+       + + AGA GYLSK   P E+V+AIR V +
Sbjct: 61  GGLEATRKIVRYNPDVKIIMLTIHTENPLPARVMQAGAAGYLSKGAAPQEMVNAIRQVNA 120

Query: 121 GRRYLCADALVNLSNPDINNVLAD-----LTKREVEVFDLLVQGKEVKEIAQTLFLSHKT 175
           G+RY+  D    ++   I    AD     L+ RE+++  ++ +G++V +I++ L LS KT
Sbjct: 121 GQRYIATDIAQQMALSQIEPQKADSPFDSLSDRELQIMLMITKGQKVADISEQLSLSPKT 180

Query: 176 VHVHRANILSKLNLTNNVDVIRFALQHQLL 205
           V+ +R  + SKLN++ +V++   A++H LL
Sbjct: 181 VNSYRYRMFSKLNISGDVELTHLAIRHGLL 210