Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 218 a.a., Response regulator UvrY from Alteromonas macleodii MIT1002

 Score =  129 bits (325), Expect = 3e-35
 Identities = 73/198 (36%), Positives = 111/198 (56%), Gaps = 1/198 (0%)

Query: 4   IALVDDHTIVRSGFAQLLNLEQDIRVQGEYESAKAAFYALTQAEVDVAIIDISMPDENGL 63
           I ++DDH IVR G   L+  E    V     S  A     T  ++DVAI+DIS+  E+G 
Sbjct: 3   ILIIDDHEIVRDGIKTLIEQEYGWHVSYAVSSLDALPSFATLDDIDVAILDISLAQESGF 62

Query: 64  SLLERLRQHNPRFKAIILSIYDSASFVKKALDAGAQGYLSKRCGPSELVSAIRTVASGRR 123
             L ++++  P  K ++LS+YD   ++ KAL+ GA GY++K     EL+ A+  +     
Sbjct: 63  DTLIKIKKDAPFIKCLMLSMYDHVGYISKALELGADGYVTKNAATKELMDALEALEKDEN 122

Query: 124 YLCADALVNLSNPDINNVLADLTKREVEVFDLLVQGKEVKEIAQTLFLSHKTVHVHRANI 183
           YL  D    L+  D   + + LT+RE E+F LL +G + K+IA  +  + KTV VHR NI
Sbjct: 123 YLSTDISKKLAFGD-KQLTSILTEREKEIFLLLAKGFQPKQIAYYIDTAPKTVMVHRTNI 181

Query: 184 LSKLNLTNNVDVIRFALQ 201
             KLN+T+   ++R AL+
Sbjct: 182 YKKLNVTSQFGLLRIALE 199