Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 943 a.a., Putative formate dehydrogenase from Xanthobacter sp. DMC5

 Score =  156 bits (395), Expect = 5e-42
 Identities = 146/595 (24%), Positives = 256/595 (43%), Gaps = 59/595 (9%)

Query: 48  CRFCGTGCSVLVGTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRMK 107
           C +CG GC+     +   +V      +   N+G +C+KG F       QDR+  P++R  
Sbjct: 244 CAYCGVGCTFKAEMRGDELVRMVPYKDGKANRGHSCVKGRFAYGYAVHQDRILKPMIRSS 303

Query: 108 DGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKLMKA 167
             +  K+     VS++ A    A ++K   +  G  SVG   S + T  E Y   KL++ 
Sbjct: 304 IHEPWKE-----VSYEEAIAYAASEFKRIQEKYGKRSVGGITSSRCTNEETYLVQKLIRG 358

Query: 168 GFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPVLWT 227
           GF +NN+D  AR C +    G   T+G       +D  E +D  ++ G+N  + HPV  +
Sbjct: 359 GFGNNNVDTCARVCHSPTGYGLSVTYGTSAGTQDFDSIEESDVVLIIGANPTDGHPVFGS 418

Query: 228 RITDR-RLSHPHVKVNVLSTYYHRSFEL-ADHGYIFHPQSDLAIANFIANYIIQNDAVNW 285
           R+  R R     + V+   T   RS  + A +     P +++AI   +A+ I+    VN 
Sbjct: 419 RLKKRLRQGAKLIVVDPRRTDVVRSPHIEAAYHLPLRPGTNVAIVTALAHVIVTEGLVNE 478

Query: 286 DFVNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAP--YTVEKA 343
            FV +   +++                               F+E+   VA   ++ E  
Sbjct: 479 QFVRERCDWEE-------------------------------FQEWAAFVAEERHSPEAV 507

Query: 344 SEISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPG 403
            + +GV  D +   A+ YA      +  + +G+ +H++G      + NL + TG I   G
Sbjct: 508 EKYTGVPADAVRGAARLYATGGNGAI-YYGLGVTEHSQGSTTVIAIANLAMATGNIGRNG 566

Query: 404 NSPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPGFHA 463
                L GQ +  G+  ++G+F H LP    +++   RA  E +W +    + ++PG   
Sbjct: 567 VGVNPLRGQNNVQGSC-DMGSFPHELPGYRHISDDATRAAFEALWGV---GLDDEPGLRI 622

Query: 464 VQQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAYPTVTAQAADL 523
                   +G     +VQ  + +Q+ P  + + +         +VV D +   TA  A +
Sbjct: 623 PNMFDAAVEGTYKGMYVQGEDILQSDP--DTKHVSAGLAALECLVVQDLFLNETANYAHV 680

Query: 524 VLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVIE-------FSKRFKVEDV 576
            LP   ++EK+G + NAERR Q   ++V      ++D W+V +       F   +     
Sbjct: 681 FLPGCSFLEKDGTFTNAERRIQ-RIRKVMAPKNGYAD-WEVTQMLSNALGFPMNYSHPGE 738

Query: 577 WPEELLAKAPQYRGKTLYDVLFKNGQVDKFPLSEARELNDDAHHFGFYIQ-KGLF 630
             +E+ A  P + G   Y +L + G V ++P +E         H G +++ KG F
Sbjct: 739 IMDEIAALTPSFAGVN-YKLLDEMGSV-QWPCNEKAPEGTPIMHIGGFVRGKGKF 791



 Score = 55.5 bits (132), Expect = 1e-11
 Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 3/135 (2%)

Query: 692 GKAWIISSPYEAPPEMPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHE 751
           GK   + + Y    E     + L L TGR+L  ++ G  TRR   +     D L  +H  
Sbjct: 787 GKGKFMLTEYVPTDEKTGPRFPLLLTTGRILSQYNVGAQTRRTENVVWHAEDVL-EIHAH 845

Query: 752 DAQARGLRRGDEVLISNSRGEVRVRVETRGRNKPPKGLVFVPFFDARILVNKLILDATDP 811
           DA+ RG+R GD V + +  G   +R     R  P  G+V+  F       N +  D +D 
Sbjct: 846 DAEVRGIRDGDFVKLDSRAGSTSLRAVISDRVAP--GVVYTTFHHPVTQANVVTTDYSDW 903

Query: 812 LSKQTDFKKCPVKIT 826
            +   ++K   V+++
Sbjct: 904 ATNCPEYKVTAVQVS 918