Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 891 a.a., Nitrate reductase from Xanthobacter sp. DMC5

 Score =  229 bits (583), Expect = 7e-64
 Identities = 221/795 (27%), Positives = 331/795 (41%), Gaps = 105/795 (13%)

Query: 45  KAPCRFCGTGCSVLVGTQDGRVVA-TQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPL 103
           K  C +CG GC V   T DGR  A  +GDP+ P N G  C KG  L + +  + RL  PL
Sbjct: 12  KTTCPYCGVGCGVKA-TPDGRGGALVEGDPDHPANLGRLCSKGAALDETLGLETRLLHPL 70

Query: 104 LRMKDGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVK 163
           +R  DG   +       SWD A D +A   +  +   GP +V  + SGQ    + YAA K
Sbjct: 71  VRGADGVLAR------ASWDDALDRIAGDLRDIIDRHGPQAVAFYLSGQLLTEDYYAANK 124

Query: 164 LMKAGFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHP 223
           L K    + N+D N+R CM+S+V G  R FG D   G Y+D + AD  VL GSN A  HP
Sbjct: 125 LAKGFLGTANVDTNSRLCMSSSVAGHKRGFGSDTVPGSYEDLDRADLIVLTGSNTAWCHP 184

Query: 224 VLWTRITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAV 283
           VL+ R+   R +    K+ V+      +   AD        +D  + + +  ++ Q+ A 
Sbjct: 185 VLFRRMEAARKARG-TKLVVIDPRRTDTGAEADLFLPLAHGTDALLFSGLLVHLAQSPAF 243

Query: 284 NWDFVNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKA 343
           +  +V  HT      T     L     +   A+   +     ++ E+ ++  A +T  + 
Sbjct: 244 DAAYVEAHT------TGFAEALAAARAVAPDAET--TARACGLAVEDVERFFALFTKTQ- 294

Query: 344 SEISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPG 403
                                  + ++ ++ G+NQ   G    + + N HL TG+I   G
Sbjct: 295 -----------------------RTVTCYSQGVNQSLVGTDKVNAILNCHLATGRIGREG 331

Query: 404 NSPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPGFHA 463
             PFSLTGQP+A G  REVG  A++L A M   +P       + W  P   I E+ G  A
Sbjct: 332 MGPFSLTGQPNAMG-GREVGGLANQLAAHMGF-SPAEVDRVRRFWGAPH--IAEREGLKA 387

Query: 464 VQQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAYPTVTAQA-AD 522
           V     +  G +   WV   N   + P+ +  R       E FI+  +     TA     
Sbjct: 388 VDVFAAIGRGEIKALWVMGTNPAVSLPDADGVR-TALEGLELFILSENVQANDTAACRPH 446

Query: 523 LVLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVIEFSKRFKVEDVWPEELL 582
           ++LP A W EK+G   N+ERR       +   GE   D W +   ++R    D +     
Sbjct: 447 VMLPAAAWGEKDGTVTNSERRISRQRPFLPLPGEVRPDWWALKGVAQRLGFGDAF----- 501

Query: 583 AKAPQYRGKTLYDVLFKNGQVDKFPLSEARELNDDAHHFGFYIQKGLFEEYAEFGRGHGH 642
               Q+RG    D+  ++  +  F        ND    F      GL E           
Sbjct: 502 ----QWRGPA--DIFREHAALSGFE-------NDGTRDFDISAFAGLTEA---------- 538

Query: 643 DLAPYDVYHQVRGLRWPVVDGKETKWRFKEGSDPYAKAGSGWDFYGKPDGKA-WIISSPY 701
                  Y  +  ++WP+  G+       EG+     AG     Y  PD +A +++  P 
Sbjct: 539 ------AYEDITPVQWPLPAGR------AEGTARLFAAGG----YFTPDRRARFVVPKPV 582

Query: 702 EAPPEMPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQARGLRRG 761
            A       ++   L TGR+ + WHT T T   P L   +P     +H +DA   GL  G
Sbjct: 583 AA--ASAGGDFPFLLNTGRIRDQWHTMTRTGLSPRLGAHIPAPFVAVHPDDAAPLGLATG 640

Query: 762 DEVLISNSRGEVRVRVETRGRNKPPKGLVFVPFF-------DARILVNKLILDATDPLSK 814
               +S++ G  R  +E    +   +G +F P         D R  V  L+   TDP+S 
Sbjct: 641 MLAEVSSAHG--RAVLEVVVDSGQQRGTLFAPIHWSHANSSDGR--VGALVHAVTDPVSG 696

Query: 815 QTDFKKCPVKITKVA 829
           Q D K  P  ++  A
Sbjct: 697 QPDAKATPAALSPYA 711