Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

 Score =  127 bits (320), Expect = 2e-33
 Identities = 151/607 (24%), Positives = 248/607 (40%), Gaps = 85/607 (14%)

Query: 3   MTRRAFVKANAAASAAAVAGITL--PASATNLIASS-DQTA-IHWDKAPCRFCGTGCSVL 58
           ++RRAF+K  + A+  A  G +L  P       AS  D++A     +  C  C  GC + 
Sbjct: 19  ISRRAFMKNTSLAAGGAAVGASLFTPGMIRKAQASEVDRSAKTEVKRTICSHCSVGCGIY 78

Query: 59  VGTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRMKDGQYHKDGEFT 118
              Q+G     +   + P N G +C KG  L +  +G+ RLK P+ +++ G++ K     
Sbjct: 79  AEVQNGVWTGQEPAFDHPFNAGGHCAKGAALREHGHGERRLKYPM-KLEGGKWKK----- 132

Query: 119 PVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKLMKAGFRSNNIDPNA 178
            +SW+ A + + +K     +  GP SV   GS + +  + Y   K M + + +NN+D  A
Sbjct: 133 -ISWEQAINEIGDKALKIREESGPDSVYFLGSAKHSNEQAYLFRK-MASLWGTNNVDHQA 190

Query: 179 RHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPVLWTRITDRRLSHPH 238
           R C ++ V G   T+G       ++D  +  + +  GSN AE HPV    I   +  +  
Sbjct: 191 RICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEAHPVAMQHILIAKEKN-S 249

Query: 239 VKVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVNWDFVNKHTHFKQAV 298
            K+ V      R+   AD+     P SD+A    +  ++ +N   NW+      + +Q V
Sbjct: 250 CKIVVADPRRTRTAAKADYFVSLRPGSDVAFIWGVLWHVFKN---NWE---DKEYIRQRV 303

Query: 299 TDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKASEISGVSPDKLITLA 358
                                         +E +  VA +T  +   ++GVS +++   A
Sbjct: 304 ---------------------------FGMDEIRAEVAKWTPAEVERVTGVSEEEVYNTA 336

Query: 359 KQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGNSPFSLTGQPSACGT 418
           K  A+ N     +W MG  QHT G         L L  G I   G       G  +  G 
Sbjct: 337 KTLAE-NRPGCVVWCMGGTQHTTGNNNTRAYCILELALGNIGKSGGGANIFRGHDNVQG- 394

Query: 419 AREVGTFAHRLPA--DMVVANPKHRAIAEKVWKLP-------------EGTIP-EKPGFH 462
           A ++G  +  LP    +   + KH A    VW +               G +P E PG  
Sbjct: 395 ATDLGVLSDTLPGYYGLTEGSWKHWA---SVWGVDFEWIKNRFDQGTYNGALPMETPG-- 449

Query: 463 AVQQDRMLKDGVL-NCYWVQCNNNMQA----GPNINEE----RLPGYRNPENFIVVSDAY 513
            +   R + DGVL N   +Q   N++A    G  +N +     +       + +V+ D Y
Sbjct: 450 -IPVSRWI-DGVLENKDNLQQRENIRAMFYWGHAVNSQTRGVEMKKAMQKLDMMVIVDPY 507

Query: 514 PTVTAQAAD-----LVLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVIEFS 568
           PTV A   D      +LP     E  G+   + R  Q   Q ++ + ES  D   +   S
Sbjct: 508 PTVAAVMNDRTDGVYLLPATTQFETYGSVTASNRSIQWRDQVIEPLFESKPDHEIMYLLS 567

Query: 569 KRFKVED 575
           ++  + D
Sbjct: 568 QKLGIAD 574



 Score = 40.4 bits (93), Expect = 5e-07
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 711 EYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQARGLRRGDEVLISNS- 769
           EY + L +GR++E+   G  TR  P L +   +    ++ +DA   G   GD V +  + 
Sbjct: 814 EYPIILTSGRLVEYEGGGEETRSNPWLAELQQEMFVEVNPKDANDLGFMDGDMVWVEGAE 873

Query: 770 RGEVRVRVETRGRNKPPKGLVFVPF 794
           +G ++V+     R KP  G+ F+PF
Sbjct: 874 KGRIKVKAMVTRRVKP--GMAFLPF 896