Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 869 a.a., Assimilatory nitrate reductase large subunit (EC 1.7.99.4) from Sphingobium sp. HT1-2

 Score =  249 bits (637), Expect = 4e-70
 Identities = 218/800 (27%), Positives = 328/800 (41%), Gaps = 131/800 (16%)

Query: 45  KAPCRFCGTGCSVLVGTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLL 104
           +  C +CG GC +       R V  +GD   P N G  C KG  L + +    RL  P++
Sbjct: 6   RTTCAYCGVGCGIAATPTGPRSVIIKGDEAHPANGGRLCSKGTHLGETVALTGRLLHPMI 65

Query: 105 RMKDGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKL 164
             +             SWD A D++A+K++ +++  GP SV  + SGQ    + Y A KL
Sbjct: 66  GKRRA-----------SWDKALDLVAKKFRETIERHGPDSVAFYVSGQLLTEDYYVANKL 114

Query: 165 MKAGFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPV 224
           MK    S NID N+R CM+SAV G  R FG D     YDD E AD  +L GSN A  HP+
Sbjct: 115 MKGFIGSANIDTNSRLCMSSAVAGHNRAFGEDIVPASYDDLEQADLILLVGSNTAWCHPI 174

Query: 225 LWTRITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVN 284
           ++ RI   R +    K+ V+      + E AD      P SD+A+   +  +       +
Sbjct: 175 VYQRIQAARAAR-GTKLVVIDPRRTETCEGADLHLPIRPGSDVALMTGLLAWCDAQGVTD 233

Query: 285 WDFVNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKAS 344
             ++  H +      D    +R  H L   A+  +               + P  ++   
Sbjct: 234 PTYLADHVNAPDGFWD---HVRTGHDLWTTAQACD---------------LDPALLKAFF 275

Query: 345 EISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGN 404
           E+   +P               + ++L++ G+NQ  RG    + + N+HL TG+I  PG 
Sbjct: 276 ELFAATP---------------RTITLFSQGINQSIRGTDQVNAIINVHLATGRIGNPGA 320

Query: 405 SPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPGFHAV 464
           +PFS+TGQP+A G  REVG  A  L A M  A P++ A   + W  P+  +  KPG  AV
Sbjct: 321 APFSITGQPNAMG-GREVGGLASTLAAHMDFA-PENVARVGRFWAAPQ--MASKPGLKAV 376

Query: 465 QQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAYPTVTAQA-ADL 523
              R + +G +   W+   N   + P+    R      P  F+VVSD      + A A +
Sbjct: 377 DLFRAIDEGRIKALWIMATNPAVSLPDAGRVRDALEAIP--FLVVSDIIADTDSSAHAHV 434

Query: 524 VLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVIEFSKRF---------KVE 574
            LP A W EK+G   N++R        +   GE+  D W + + ++R          +  
Sbjct: 435 RLPAAGWGEKDGTVTNSDRTISRQRPFMALPGEARPDWWIITQVARRMGWKNAFAYDRPA 494

Query: 575 DVWPEELLAKAPQYRGKTLYDVLFKNGQVDKFPLSEARELNDDAHHFGFYIQKGLFEEYA 634
           D+W E     A Q  G+ L ++                                     A
Sbjct: 495 DIWREHARLTAYQNEGQRLLNL----------------------------------RAQA 520

Query: 635 EFGRGHGHDLAPYDVYHQVRGLRWPVVDGKETKWRFKEGSDPYAKAGSGWDFYGKPDGKA 694
             G          D Y  +   RW              G  P+A        +  PDGKA
Sbjct: 521 AIGN---------DAYDAMDSFRW--------------GGAPFADG-----HFPTPDGKA 552

Query: 695 WIISSPYEAPPEMPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQ 754
            ++ +  +   + P  ++ L L TGR  + WHT T T   P+L +   + L  +H +DA 
Sbjct: 553 RLVLT-RQMDLQGPLRDWPLTLNTGRYRDQWHTMTRTGLAPKLARHREEPLVEIHPQDAD 611

Query: 755 ARGLRRGDEVLISNSRGEVRVRVETRGRNKPPKGLVFVPF-----FDARILVNKLILDAT 809
           A GL   D   +S ++G    RV      +P  G +F P        +      L     
Sbjct: 612 ALGLADRDLARVSTAQGNSLFRVSISDGQRP--GEIFTPIHWTDQISSGGRTGLLPRPLV 669

Query: 810 DPLSKQTDFKKCPVKITKVA 829
           DP S Q  FK  P  + KV+
Sbjct: 670 DPHSGQPGFKSTPAAVEKVS 689