Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 960 a.a., putative Formate dehydrogenase, alpha subunit from Pseudomonas putida KT2440

 Score =  140 bits (353), Expect = 3e-37
 Identities = 120/504 (23%), Positives = 209/504 (41%), Gaps = 55/504 (10%)

Query: 48  CRFCGTGCSVLVGTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRMK 107
           C +CG GCS     +  ++V    D     N G  C+KG F        DR+  P++R +
Sbjct: 250 CAYCGVGCSFRAEIKGDQLVRMVPDKNGGANHGHACVKGRFAWGYATHPDRITKPMIRKR 309

Query: 108 DGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKLMKA 167
                 +  +  VSWD A    A +++      G  S+G   S + T  E Y   KL++ 
Sbjct: 310 -----LEDPWQEVSWDEAVTYAASEFRRIQLKYGRDSIGGITSSRCTNEEAYLVQKLVRT 364

Query: 168 GFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPVLWT 227
            F +NN+D  AR C +    G  +T G       +D    AD  ++ G+N  + HPV  +
Sbjct: 365 AFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQSFDSVMQADVVLVIGANPTDAHPVFGS 424

Query: 228 RITDRRLSHPHV------KVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQND 281
           ++  R      +      +++++ + + R    AD      P +++A+ N +A+ I+   
Sbjct: 425 QLKRRLRQGARLIVIDPRRIDLVDSPHAR----ADLHLQLRPGTNVAMLNALAHVIVTEG 480

Query: 282 AVNWDFVNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKK--SVAPYT 339
            +   F++                              +GD     F  ++   S+    
Sbjct: 481 LLAQSFID--------------------------ARCETGD-----FARWRDFVSLPDNA 509

Query: 340 VEKASEISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKI 399
            E    + GV  +++   A+ YA      +  + +G+ +H++G      + NL + TG I
Sbjct: 510 PEVLGPVCGVPAEQIRAAARLYATGGNAAI-YYGLGVTEHSQGSTAVMGIANLAMATGNI 568

Query: 400 ATPGNSPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKP 459
              G     L GQ +  G+  ++G+F H LP    V+N   RA  E+ W +   T+   P
Sbjct: 569 GREGVGVNPLRGQNNVQGSC-DMGSFPHELPGYRHVSNEGVRAEFEQAWGV---TLQPDP 624

Query: 460 GFHAVQQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAYPTVTAQ 519
           G           DG     + Q  +  Q+ P  N + +         +VV D +   TA+
Sbjct: 625 GLRIPNMFEAALDGSFKALYCQGEDIAQSDP--NTQHVTAALLAMECVVVQDIFLNETAK 682

Query: 520 AADLVLPTAMWVEKEGAYGNAERR 543
            A + LP + ++EK+G + NAERR
Sbjct: 683 FAHVFLPGSSFLEKDGTFTNAERR 706



 Score = 58.9 bits (141), Expect = 1e-12
 Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 3/137 (2%)

Query: 692 GKAWIISSPYEAPPEMPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHE 751
           GK   + + Y    E  N  Y L L TGR+L  ++ G  TRR   +     D L  +H  
Sbjct: 793 GKGRFMLTGYVPTDEKVNNRYPLLLTTGRILSQYNVGAQTRRTGNVAWHDADRL-EIHPT 851

Query: 752 DAQARGLRRGDEVLISNSRGEVRVRVETRGRNKPPKGLVFVPFFDARILVNKLILDATDP 811
           DA++RG++ GD V I +  G+  +R +   R  P  G+V+  F       N +  D +D 
Sbjct: 852 DAESRGIQDGDWVGIGSRAGQTVLRAKVSTRVAP--GVVYTTFHFPESGANVITTDNSDW 909

Query: 812 LSKQTDFKKCPVKITKV 828
            +   ++K   V++ KV
Sbjct: 910 ATNCPEYKVTAVEVVKV 926