Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 1341 a.a., assimilatory nitrate reductase/sulfite reductase from Pseudomonas putida KT2440

 Score =  320 bits (819), Expect = 4e-91
 Identities = 239/811 (29%), Positives = 357/811 (44%), Gaps = 126/811 (15%)

Query: 45  KAPCRFCGTGCSVLVGTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLL 104
           ++ C +CG GC +++   DG+V    GD   P N G  C KG    + +    R+    L
Sbjct: 7   RSVCPYCGVGCGIVMSVADGKVGKISGDKLHPSNFGRLCTKGLTAHQPLSASGRMADAYL 66

Query: 105 RMKDGQYHKDGEFTPV--SWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAV 162
           R +  Q        PV  S D A    AE+ +  +   GP +V ++ SGQ ++   Y A 
Sbjct: 67  RQQRSQ-------PPVRTSMDQAIAATAERLRGIIDQHGPDAVALYVSGQMSLEAQYLAN 119

Query: 163 KLMKAGFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMH 222
           KL K   R+ +I+ N+R CMASA  G+  + G D P G Y DFEHAD F++ G+NMA+ H
Sbjct: 120 KLAKGFIRTRHIESNSRLCMASASSGYKLSLGADGPPGSYQDFEHADVFLVIGANMADCH 179

Query: 223 PVLWTRITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDA 282
           P+L+ R+ DR       K+ V+      + + AD      P SD+A+ N + + + +N  
Sbjct: 180 PILFLRLLDR--VKAGAKLIVVDPRRSATADKADLFLQVRPGSDMALLNGLLHLLHRNGH 237

Query: 283 VNWDFVNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEK 342
            N DF+ +HT                                   ++E    +  YT E+
Sbjct: 238 TNPDFIARHTE---------------------------------GWDEMPAFLDDYTPER 264

Query: 343 ASEISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATP 402
            + I+G++   +I  A+     N   MS WTMG+NQ   G W  + + NLHL TG I  P
Sbjct: 265 VAAITGLAEADIIKAAEWIGSAN-NWMSCWTMGLNQSIHGTWHSNAICNLHLATGAICRP 323

Query: 403 GNSPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPGFH 462
           G+ PFSLTGQP+A G  R++G     LP          RA  E+ W+LP G++  + G  
Sbjct: 324 GSGPFSLTGQPNAMG-GRDMGYMGPGLPGQRSALVEDDRAFVERQWQLPPGSLRSEGGEG 382

Query: 463 AVQQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAY-PTVTAQAA 521
            V     +K G +   WV C+N + +  N  ++ + G R  E  ++  DA+  T T + A
Sbjct: 383 TVALFGQMKAGEVKACWVICSNPVASVAN-RQQVIDGLRKAE-LVITQDAFLDTETNRYA 440

Query: 522 DLVLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVIEFSKRFKVEDVWPEEL 581
           D++LP A+W E EG   N+ER   +  + V+  G+S  D WQ+I                
Sbjct: 441 DILLPAALWAEGEGVMINSERNLTLMPRAVEPPGQSLPD-WQIIA--------------- 484

Query: 582 LAKAPQYRGKTLYDVLFKNGQVDKFPLSEARELNDDAHHFGFYIQKGLFEEYAEFGRGHG 641
                         V    G  D F    A  + ++   F                   G
Sbjct: 485 -------------RVACAMGYADAFDYPNAEAVYEEIRRF--------------HNPSTG 517

Query: 642 HDLAPYDVYHQVRGLRWPVVDGKETKWRFKEGSDP------YAKAGSG----WDFYGK-- 689
           +DL         RG+ +  +  +  +W    GS+       Y   GS      D  G+  
Sbjct: 518 YDL---------RGIGYAELRTQPRQWPCAPGSEQHRSPLRYLNDGSSQALLLDARGRRP 568

Query: 690 ------PDGKAWIISSPYEAPPEMPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPD 743
                   GKA   + P+    E+P+++Y + L TGRV   WHT T T +VP L K  P 
Sbjct: 569 ALAFPTASGKAHFFARPWLPAAEVPDDDYPMVLNTGRVQHQWHTLTKTGKVPALNKLEPG 628

Query: 744 ALCFMHHEDAQARGLRRGDEVLISNSRGEVRVRVETRGRNKPPKGLVFVPF-----FDAR 798
               +H EDA   G+   D+V + + RG+  +      R  P  G  F PF        +
Sbjct: 629 PYLEIHPEDAARLGVAEKDQVAVRSRRGQAVLPARISDRVMP--GNCFAPFHWNDLIGEQ 686

Query: 799 ILVNKLILDATDPLSKQTDFKKCPVKITKVA 829
           + +N    DA DPLS Q  FK C V + +VA
Sbjct: 687 LAINAATCDAVDPLSLQPAFKHCAVALERVA 717