Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 961 a.a., formate dehydrogenase from Magnetospirillum magneticum AMB-1

 Score =  137 bits (345), Expect = 3e-36
 Identities = 153/607 (25%), Positives = 248/607 (40%), Gaps = 99/607 (16%)

Query: 3   MTRRAFVKANA--AASAAAVAGITL-PASATNLIASSDQTAIHWDKAPCRFCGTGCSVLV 59
           M RRAF++ +   A  AA + GI        + +  +        +A C  C  GC+V  
Sbjct: 27  MDRRAFLRRSGLTAGGAALLGGIGAGTVRKADAVPVAPDAKAEVKRAICTHCSVGCTVNA 86

Query: 60  GTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRMKDGQYHKDGEFTP 119
              +G  +  +   ++P+N G +C KG  + +  +G  RLK P+ +++ G+Y +      
Sbjct: 87  EVSNGVWIGQEPAFDSPLNLGSHCAKGAAVREHAHGDRRLKYPM-KLEGGKYKR------ 139

Query: 120 VSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKLMKAGFRSNNIDPNAR 179
           +SW+ A   + ++     +T GP SV   GS +++  + Y   K   A + +NN+D  AR
Sbjct: 140 ISWEQAITEVGDRLLKIRETAGPDSVYWLGSAKFSNEQAYLMRKFA-ALWGTNNVDHQAR 198

Query: 180 HCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPVLWTRITDRRLSHPHV 239
            C ++ V G  +T+G       Y+D  ++ A    GSN AE HPV    I   +      
Sbjct: 199 ICHSTTVAGVAQTWGYGAMTNSYNDIHNSKAMFFIGSNAAEAHPVAMLHILKAK-EQNKA 257

Query: 240 KVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVNWDFVNKHTHFKQAVT 299
            + V    + R+   AD      P +D+ +   I  +I +N   + +F+ K         
Sbjct: 258 PLIVCDPRFTRTAAHADEYVRMRPGTDVPLIWGIMWHIFENGWEDKEFIRKRV------- 310

Query: 300 DIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKASEISGVSPDKLITLAK 359
              +G+                       ++ K  VA +T E+   ++GV   +L  +A+
Sbjct: 311 ---WGM-----------------------DQVKAEVAKWTPEETERVTGVPGAQLKRVAQ 344

Query: 360 QYA--DPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGNSPFSLTGQPSACG 417
             A   P T V   W MG  QHT G        NL L  G +   G       G  +  G
Sbjct: 345 ILATHKPGTVV---WCMGGTQHTVGNANVRAYCNLQLALGNVGVAGGGTNIFRGHDNVQG 401

Query: 418 TAREVGTFAHRLPADMVVANP--KHRAIAEKVW-----------KLPEGTIPEKPGF--- 461
            A ++G     LPA   +A P  KH A   +VW           K PE  + E PG    
Sbjct: 402 -ATDMGLDVTTLPAYYGLAAPAWKHWA---RVWGLDYDYIKGRFKTPE--LMEAPGIPVS 455

Query: 462 ----------HAVQQDRMLKDGVLNCYWVQCNNNMQAGPNINE--ERLPGYRNPENFIVV 509
                       + Q   +K  V   YW    N+    P + +  E+L       + +V+
Sbjct: 456 RWYDGVNEAKENIAQPEPIKAMV---YWGHAPNSQTRQPELKKAMEKL-------DTLVI 505

Query: 510 SDAYPTVTAQAAD-----LVLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQV 564
            D YPTV+A   D      +LP A   E +G+   + R  Q   Q +K + E  +D   +
Sbjct: 506 IDPYPTVSAVLHDRTDGVYLLPAATQFEVDGSRTASNRSIQWSEQVIKPMFECKADQEIM 565

Query: 565 IEFSKRF 571
             F+K+F
Sbjct: 566 YLFAKKF 572



 Score = 44.3 bits (103), Expect = 3e-08
 Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 1/86 (1%)

Query: 709 NEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQARGLRRGDEVLISN 768
           ++E+ + L +GR++E+   G  TR  P L +  P+    ++  DA   G+R GD V +  
Sbjct: 820 SKEFPIILTSGRLVEYEGGGDETRSNPWLAELQPEMFVEVNPFDANNAGIRAGDYVWVHG 879

Query: 769 SRGEVRVRVETRGRNKPPKGLVFVPF 794
             G  +V+V+ R   +  +G+ F+PF
Sbjct: 880 PEGG-KVKVKARITERVGRGVAFMPF 904