Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 891 a.a., formate dehydrogenase subunit alpha from Magnetospirillum magneticum AMB-1

 Score =  161 bits (408), Expect = 1e-43
 Identities = 142/533 (26%), Positives = 221/533 (41%), Gaps = 61/533 (11%)

Query: 48  CRFCGTGCSVLVGTQDGRVVATQG-DPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRM 106
           C +CG GC V      G +V  +G D EA  N    C+KG F         RL  PL+R 
Sbjct: 217 CPYCGVGCQVTYHVAGGDIVGAKGRDGEA--NHQRLCVKGRFGFDYSRHPQRLTVPLIR- 273

Query: 107 KDGQYHKDGE-------FTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGY 159
           K+G   +  +       F P SWD A D  A    A LK    +++   GS + +  E Y
Sbjct: 274 KEGAPKEPLDPADPFTHFRPASWDEALDAAA----AGLKRLPASALAGLGSAKGSNEEAY 329

Query: 160 AAVKLMKAGFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMA 219
              KL++ GF+SNN+D   R C AS+V   +   G         +  +A+  VL G+N +
Sbjct: 330 LFQKLVRTGFKSNNVDHCTRLCHASSVAALLEGIGSGAVTAPVAEVANAEVIVLIGANPS 389

Query: 220 EMHPVLWTRITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQ 279
             HPV  + I  +       ++ +L          A H   F+  +D+A+ N + + I+ 
Sbjct: 390 ANHPVAASFI--KNAVKGGAQLVILDPRGQALTRFASHHLKFNNGTDVALLNAMLHVIVA 447

Query: 280 NDAVNWDFVNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYT 339
            +  + DFV   T                                   F E  + +  Y 
Sbjct: 448 EELYDRDFVQART---------------------------------TGFAELAQHLKSYA 474

Query: 340 VEKASEISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKI 399
            E  + + G+    +  +A+ YA      M LW MG++QH+ G      +  L LL G +
Sbjct: 475 PEAMAPLCGIDAGTIRVVARLYARA-ASAMILWGMGVSQHSHGTDNSRCLIALALLCGHV 533

Query: 400 ATPGNSPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKP 459
             PG+    L GQ +  G A + G     LP    V     R   E  W +    +    
Sbjct: 534 GRPGSGLHPLRGQNNVQG-ASDAGLIPMMLPDYGRVGLDAVRQRFEAGWGV---ELDPDS 589

Query: 460 GFHAVQQDRMLKDGVLNCYWVQCNNNMQAGPNINEER--LPGYRNPENFIVVSDAYPTVT 517
           G   V+     + G++   +V+  N   + P++   R  L G  +    +VV D + T T
Sbjct: 590 GLTVVEMMDAAQAGIIRGLYVEGENPAMSDPDLAHARQALAGLEH----LVVQDIFLTET 645

Query: 518 AQAADLVLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVIEFSKR 570
           A  AD+VLP + + EK G++ N +R  Q+  Q +   GE+ SD W + E  +R
Sbjct: 646 AMLADVVLPASSFFEKTGSFTNTDRHIQMGRQVIDPPGEARSDLWIITEMGRR 698



 Score = 79.0 bits (193), Expect = 1e-18
 Identities = 52/150 (34%), Positives = 70/150 (46%), Gaps = 2/150 (1%)

Query: 676 PYAKAGSGWDFYGKPDGKAWIISSPYEAPPEMPNEEYDLWLCTGRVLEHWHTGTMTRRVP 735
           P  KA    D +   DGKA ++ +   AP E P+ +Y   L TGRVLEHWHTG+MTRR  
Sbjct: 739 PAGKAILFGDVFPTGDGKARLVPASGLAPAENPDADYPFLLSTGRVLEHWHTGSMTRRSD 798

Query: 736 ELYKAVPDALCFMHHEDAQARGLRRGDEVLISNSRGEVRVRVETRGRNKPPKGLVFVPFF 795
            L +        +   D    GL  G  V + + RG V        R  P  G +F+PF 
Sbjct: 799 VLDRLQGLPAVNVSPGDMARLGLAEGARVRLESRRGAVEAAAVADSRLSP--GALFLPFC 856

Query: 796 DARILVNKLILDATDPLSKQTDFKKCPVKI 825
                 N L   A DP++K  + K   V++
Sbjct: 857 FTEAAANLLTNPALDPVAKIPELKVSAVRL 886