Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 841 a.a., Anaerobic dehydrogenases, typically selenocysteine-containing from Enterobacter asburiae PDN3

 Score =  206 bits (524), Expect = 4e-57
 Identities = 210/786 (26%), Positives = 314/786 (39%), Gaps = 142/786 (18%)

Query: 45  KAPCRFCGTGCSVLVGTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLL 104
           +  C +CG GC V V   +G  V+  GD   P N G  C+KG  L +    Q RL  P++
Sbjct: 5   RTTCPYCGVGCGV-VARVEGEAVSVHGDETHPANLGRLCVKGSALGETTGLQGRLLRPVV 63

Query: 105 RMKDGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKL 164
                    DG    V W  A +   E+ +  +   GP +V  + SGQ    + YAA KL
Sbjct: 64  ---------DG--LEVDWAQALNAAGERLREIIDKWGPQAVAFYASGQLLTEDYYAANKL 112

Query: 165 MKAGFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPV 224
           MK    + NID N+R CM+SAVVG+ R FG D     Y+D E++D  VL GSN A  HPV
Sbjct: 113 MKGFIGAANIDTNSRLCMSSAVVGYKRAFGEDVVPCGYEDVENSDLVVLAGSNAAWTHPV 172

Query: 225 LWTRITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVN 284
           L+ R+   +  +P + V V+      + ++AD      P SD  +   + N +IQ     
Sbjct: 173 LYQRLVQAKHHNPQMMVVVIDPRRTATCDIADLHLALAPGSDAGLFVGLLN-VIQG---- 227

Query: 285 WDFVNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKAS 344
                                 D+ P+++ A                             
Sbjct: 228 ---------------------TDEWPVERVA----------------------------- 237

Query: 345 EISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGN 404
              G+SP  + T    +     + ++L+TMG+NQ T G    + + N+HL +GK   PG 
Sbjct: 238 AFCGLSPQDIGTFYDWFMTA-PRAITLYTMGINQSTSGSDKCNAIINVHLASGKFNRPGC 296

Query: 405 SPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPGFHAV 464
            PFSLTGQP+A G  REVG  A++L A M    P   +   + W      + + PG  AV
Sbjct: 297 GPFSLTGQPNAMG-GREVGGLANQLAAHMNF-EPDDLSRVARFWGTER--LAQTPGLMAV 352

Query: 465 QQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAYPTVTAQAADLV 524
           +    +  G +   W+   N   + P+ +        N    ++      T T++ A + 
Sbjct: 353 ELFDAIARGEVKAVWIMGTNPAVSLPD-SHAVCQALANCPLVMISEVMKDTDTSRFAHIR 411

Query: 525 LPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVIEFSKRFKVEDVWPEELLAK 584
            P   W EK+G   N+ERR       +   GE+  D W V + +KR      + E    +
Sbjct: 412 FPALGWGEKDGTVTNSERRISRQRAFLPAPGEAKPDWWIVAQMAKRLG----YGEAFAWQ 467

Query: 585 APQYRGKTLYDVLFKNGQVDKFPLSEARELNDDAHHFGFYIQKGLFEEYAEFGRGHGHDL 644
            PQ       ++  ++  +  F    AR LN                E A   R     L
Sbjct: 468 HPQ-------EIFCEHAALTAFENDGARALN--------------LHELAALTREEWDQL 506

Query: 645 APYDVYHQVRGLRWPVVDGKETKWRFKEGSDPYAKAGSGWDFYGKPDGKAWIISSPYEAP 704
            PY         +WP             GS P                +  I+     + 
Sbjct: 507 EPY---------QWPT------------GSFP----------------RRNIVPVNPLSH 529

Query: 705 PEMPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQARGLRRGDEV 764
               +  Y L L +GR+ + WHT T T  V  L + + +    +   DA    L  G   
Sbjct: 530 GATVSALYPLILNSGRIRDQWHTMTRTGYVARLMQHIAEPFVEVGPADAVRFSLCDGQLA 589

Query: 765 LISNSRGEVRVRVETRGRNKPPKGLVFVPF-----FDARILVNKLILDATDPLSKQTDFK 819
            IS+ RG +  RV  R  +   +G  F P      F  +  VN L+    DP+S Q + K
Sbjct: 590 RISSPRGVMVARV--RISDGIREGEAFAPMHWNAGFARQGKVNALVEGRCDPVSGQPESK 647

Query: 820 KCPVKI 825
           +  V+I
Sbjct: 648 QTAVRI 653