Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 882 a.a., nitrate reductase from Dickeya dianthicola ME23

 Score =  283 bits (725), Expect = 2e-80
 Identities = 229/794 (28%), Positives = 355/794 (44%), Gaps = 117/794 (14%)

Query: 45  KAPCRFCGTGCSVLVGTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLL 104
           +  C +CG GC V+   Q    V  +GD   P N G  C+KG  L   +  Q RL  PL 
Sbjct: 5   RTTCPYCGVGCGVIATPQPDGRVTIEGDSRHPANLGRLCVKGSALGDTLDLQGRLLWPLA 64

Query: 105 RMKDGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKL 164
              DG  H+      VSWD A   +A+     +   GP +V  +GSGQ    + Y A KL
Sbjct: 65  ---DG--HR------VSWDQALGRVAQSLGDIIAQHGPQAVAFYGSGQLLTEDYYVANKL 113

Query: 165 MKAGFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPV 224
           MK    S N+D N+R CMASAVVG+ R  G D     Y+D E AD  VL GSN A  HPV
Sbjct: 114 MKGFIGSANMDTNSRLCMASAVVGYKRALGADAVPCNYEDIEQADLVVLVGSNTAWAHPV 173

Query: 225 LWTRITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVN 284
           ++ R+   +   PH++V V+   +  + + A+      P SD  + N +  ++ Q +A  
Sbjct: 174 VYQRLVQAKQQRPHMRVVVIDPRHTATCDAAELHLPLAPGSDAGLFNGLLRWLAQRNA-- 231

Query: 285 WDFVNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKAS 344
                       A+ D   G+        +A  A + D               +TVE+ +
Sbjct: 232 ------------ALPDGLSGV--------EAALATADD---------------WTVERVA 256

Query: 345 EISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGN 404
           E   +  + +    + +AD + KV++L++ G+NQ + G    + + N+HL +G+I   G 
Sbjct: 257 EFCQLDSEDVACFYQWFADTD-KVVTLYSQGINQSSSGSDKCNAIINVHLFSGRIGRTGC 315

Query: 405 SPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPGFHAV 464
            PFS+TGQP+A G  REVG  A++L A M   +P+      + W      +   PG  AV
Sbjct: 316 GPFSITGQPNAMG-GREVGGLANQLAAHMGF-SPQEVDRVGRFW--GSDRVAPMPGLMAV 371

Query: 465 QQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAY-PTVTAQAADL 523
              R ++ G +   W+   N + + P  +  R    R P   ++VSD    T TA  A +
Sbjct: 372 DLFRAIEAGQVKAVWIMGTNPVVSMPEADRVRQALLRCP--LVIVSDVMRHTDTADCAHV 429

Query: 524 VLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVIEFSKRFKVEDVW----PE 579
           +LP   W EK+G   N+ERR       +   GE+ +D W + + ++R      +    P 
Sbjct: 430 LLPALAWGEKDGTVTNSERRISRQRAFLPAPGEAKADWWILSQVAQRMGFGAAFDYRHPA 489

Query: 580 ELLAKAPQYRGKTLYDVLFKNGQVDKFPLSEARELNDDAHHFGFYIQKGLFEEYAEFGRG 639
           ++  +     G       F+N     F +S    L+D+                      
Sbjct: 490 QIFREHAALSG-------FENQGQRAFNISALATLSDEQ--------------------- 521

Query: 640 HGHDLAPYDVYHQVRGLRWPVVDGKETKWRFKEGSDPYAKAGSGWDFYGKPDGKAWIISS 699
                     + Q+  ++WPV           +G+      G  W     PDGKA +++ 
Sbjct: 522 ----------WRQLTPVQWPVTANA------GDGTGRLYSDGRCW----HPDGKARLLAI 561

Query: 700 PYEAPPEMPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQARGLR 759
             + P   P+  Y L L TGRV + WHT T T + P L + +P+  C +H +DA   G+ 
Sbjct: 562 TPQLPANPPSSAYPLVLNTGRVRDQWHTMTRTGKAPRLMRHLPEPYCDLHPQDALNAGVH 621

Query: 760 RGDEVLISNSRGEVRVRVET-RGRNKPPKGLVFVPF-----FDARILVNKLILDATDPLS 813
            G+ V IS + G +  R +  RG+    +G +FVP      F A+   + L+   TDP S
Sbjct: 622 DGELVRISAASGWMLARAQVQRGQQ---RGSIFVPMHWNRQFSAQARADSLVAAVTDPYS 678

Query: 814 KQTDFKKCPVKITK 827
            Q + K+  V+I +
Sbjct: 679 GQPESKQARVRIQR 692