Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 969 a.a., Nitrate reductase from Alteromonas macleodii MIT1002

 Score =  247 bits (631), Expect = 2e-69
 Identities = 222/809 (27%), Positives = 342/809 (42%), Gaps = 121/809 (14%)

Query: 48  CRFCGTGCSVLVGTQDGRVVAT----QGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPL 103
           C +CG GC V +         T    +G PE P N G  C+KG  L +      RL  P 
Sbjct: 20  CPYCGVGCGVDISCNVSPSAITLDTVKGTPEHPANYGRLCVKGTNLLETNDVNGRLLHPT 79

Query: 104 LRMKDGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVK 163
           +    GQ         V WDT  DV+A+K  +++   G  +V  + SGQ    + Y A K
Sbjct: 80  MA---GQ--------SVDWDTVTDVIADKITSTIAQYGADAVAFYVSGQLLTEDYYIANK 128

Query: 164 LMKAGFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHP 223
           LMK    S NID N+R CM+SAV  + R FG D     Y D E  D  V+ GSN A  HP
Sbjct: 129 LMKGYIGSANIDTNSRLCMSSAVAAYKRAFGEDVVPCDYTDLECTDLLVITGSNAAWAHP 188

Query: 224 VLWTRITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAV 283
           VL+ RI   +L +P++KV V+      +  +AD      P SD+A+ N + +Y      +
Sbjct: 189 VLFQRIQRAKLKNPNMKVIVIDPRKTETCTIADLHLPVKPGSDVALFNGLLSYANAQGRI 248

Query: 284 NWDFVNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKA 343
           +          K AV     GL                       +E  KS    T++  
Sbjct: 249 D----------KSAVDTYAEGL-----------------------DETLKSANALTLDDV 275

Query: 344 SEISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPG 403
           +E+  +  + +      +   ++ + + ++MG+NQ + GV     + N HL    IA  G
Sbjct: 276 AEVCDLDVNSIKAFFDAFCKASSAI-TFYSMGVNQSSAGVDKAQAIINCHLAMDLIAKDG 334

Query: 404 NSPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPGFHA 463
             PFS+TGQP+A G  REVG  A+ L A M + NP+H +  +  W  P   +P+  G  A
Sbjct: 335 CGPFSITGQPNAMG-GREVGGLANMLAAHMDLENPEHISAVKTYWNAP--VMPKGQGLKA 391

Query: 464 VQQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAYPT-VTAQAAD 522
           V     ++ G +   W+   N + + P  N  ++    +  + +VVSD   +  T   A 
Sbjct: 392 VDLFNAIESGKVKFVWIMGTNPVVSMP--NRGQVERALSKCDMVVVSDIVESNDTLNYAH 449

Query: 523 LVLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVI-------EFSKRFKVED 575
           + LP   W EK+G   N+ERR       +   G +  D WQ++        F + F    
Sbjct: 450 IALPATGWSEKDGTVTNSERRISRQRGILPPPGSAKHD-WQILCEVAGKMGFGEAFNF-- 506

Query: 576 VWPEELLAKAPQYRGKTLYDVLFKNG--QVDKFPLSEARELNDDAHHFGFYIQKGLFEEY 633
             P ++     +Y G T Y     NG  Q+D  PL    E                    
Sbjct: 507 THPSQIFC---EYAGLTGYQ---NNGKRQLDLSPLQALSEAQ------------------ 542

Query: 634 AEFGRGHGHDLAPYDVYHQVRGLRWPV------VDGKETKWRFKEGSDPYAKAGSGWD-- 685
                           Y+ +  L+WP       V+   +   FK  S P   +   ++  
Sbjct: 543 ----------------YNGLSPLQWPFQNVNKGVNTPTSDANFKANSKPSLTSKRPFENK 586

Query: 686 FYGKPDGKAWIISSPYEAPPEMPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDAL 745
            +  P+GKA +I   Y+AP ++ ++ Y   + +GR  + WHT T T +  +L   +P A 
Sbjct: 587 QFSTPNGKAKLIPVTYKAPLQITSKAYPFVVNSGRARDQWHTMTRTGKAAKLLAHMPSAY 646

Query: 746 CFMHHEDAQARGLRRGDEVLISNS-RGEVRVRVETRGRNKPPKGLVFVPF-----FDARI 799
             ++ +DA   G+  GD V +S++   +  V    +      KG VF+P      + +  
Sbjct: 647 VHINPKDAAELGVESGDLVSLSSAVCKDAPVIYPVKADTDMRKGEVFIPIHWSAQWGSHS 706

Query: 800 LVNKLILDATDPLSKQTDFKKCPVKITKV 828
            +  L   A DP+S Q + K   V I  V
Sbjct: 707 KLGALYASAVDPISGQPELKHAAVAIAPV 735