Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 960 a.a., formate dehydrogenase alpha subunit from Agrobacterium fabrum C58

 Score =  153 bits (387), Expect = 4e-41
 Identities = 145/604 (24%), Positives = 257/604 (42%), Gaps = 77/604 (12%)

Query: 48  CRFCGTGCSVLVGTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRMK 107
           C +CG GCS     +   +V      +   N+G +C+KG F       +DR+  P++R  
Sbjct: 256 CAYCGVGCSFKAEMRGEELVRMVPWKDGQANRGHSCVKGRFAYGYATHRDRILNPMIREN 315

Query: 108 DGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKLMKA 167
            G   ++     VSWD AF  +A +++      G  S+G   S + T  E +   KL++A
Sbjct: 316 IGDPWRE-----VSWDAAFAYVASEFRRIQGKYGRESIGGITSSRCTNEETFLVQKLVRA 370

Query: 168 GFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPVLWT 227
           GF +NN+D  AR C +    G  + FG       +D  E +D  ++ G+N  + HPV  +
Sbjct: 371 GFGNNNVDTCARVCHSPTGYGLGQAFGTSAGTQNFDSVEQSDVVLVIGANPTDGHPVFGS 430

Query: 228 RITDRRLSHPHVKVNVLSTYYHRSFELADHGYI---FH----PQSDLAIANFIANYIIQN 280
           R+  R       K+ V+     R  +L    ++   FH    P +++A+   +A+ I+  
Sbjct: 431 RLKKR--LRQGAKLIVIDP---RRIDLVRTPHVEAAFHLPLLPGTNVAVLTALAHVIVTE 485

Query: 281 DAVNWDFVNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVA--PY 338
              N  F+ +   + +                               FE++   VA   +
Sbjct: 486 GLFNEAFIRERCDWSE-------------------------------FEDWAAFVAEPQH 514

Query: 339 TVEKASEISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGK 398
           + E+    +GV  + L   A+ YA      +  + +G+ +H++G      + NL ++TG 
Sbjct: 515 SPEETERFTGVPAEDLRGAARLYATGGNGAI-YYGLGVTEHSQGSTTVMAIANLAMVTGN 573

Query: 399 IATPGNSPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEK 458
           I  PG     L GQ +  G+  ++G+F H LP    +++   R + EK+W +    +  +
Sbjct: 574 IGRPGVGVNPLRGQNNVQGSC-DMGSFPHELPGYRHISDDATRDVFEKLWGV---KLNNE 629

Query: 459 PGFHAVQQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAYPTVTA 518
           PG           DG     ++Q  + +Q+ P  + + +         +VV D +   TA
Sbjct: 630 PGLRIPNMLDAAVDGSFKGIYIQGEDILQSDP--DTKHVSAGLAAMECVVVHDLFLNETA 687

Query: 519 QAADLVLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVIE-------FSKRF 571
             A + LP + ++EK+G + NAERR     ++V +    ++D W+V +        +  +
Sbjct: 688 NYAHVFLPGSTFLEKDGTFTNAERRIN-RVRKVMSPKNGYAD-WEVTQKLAQAMGLTWNY 745

Query: 572 KVEDVWPEELLAKAPQYRGKTLYDVLFKNGQV-----DKFPLSEARELNDDAHHFGFYIQ 626
                  +E+ A  P +     Y  L + G V     +KFP     E +   H  GF   
Sbjct: 746 THPSEIMDEIAATTPSF-ASVSYAYLEEKGSVQWPCNEKFP-----EGSPIMHVDGFVRG 799

Query: 627 KGLF 630
           KG F
Sbjct: 800 KGKF 803



 Score = 55.8 bits (133), Expect = 1e-11
 Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)

Query: 692 GKAWIISSPYEAPPEMPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHE 751
           GK   I + Y A  E     + L L TGR+L  ++ G  TRR   +     D L  +H  
Sbjct: 799 GKGKFIRTEYVATDERTGPRFPLLLTTGRILSQYNVGAQTRRTENVVWHEEDRL-EIHPH 857

Query: 752 DAQARGLRRGDEVLISNSRGEVRVRVETRGRNKPPKGLVFVPFFDARILVNKLILDATDP 811
           DA+ RG++ GD + + +  G+  +R     R  P  G+V+  F       N +  D +D 
Sbjct: 858 DAEQRGVKDGDWIKLVSRSGDTTLRALITDRVAP--GVVYTTFHHPGTQANVITTDFSDW 915

Query: 812 LSKQTDFKKCPVKIT 826
            +   ++K   V+++
Sbjct: 916 ATNCPEYKVTAVQVS 930