Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 834 a.a., nitrate reductase catalytic subunit from Agrobacterium fabrum C58

 Score = 1184 bits (3063), Expect = 0.0
 Identities = 563/831 (67%), Positives = 658/831 (79%), Gaps = 3/831 (0%)

Query: 2   KMTRRAFVKANAAASAAAVAGITLPASATNLIASSDQTAIHWDKAPCRFCGTGCSVLVGT 61
           ++TRR  +KA+AA  AAA AGI LPA+A  +        I W KAPCRFCGTGC V+VG 
Sbjct: 4   ELTRRNLLKAHAAGIAAATAGIALPAAAQPVPGGVSALQIKWSKAPCRFCGTGCGVMVGV 63

Query: 62  QDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLLRMKDGQYHKDGEFTPVS 121
           ++G+VVAT GD +A VN+GLNCIKGYFLSKIMYG+DRL+TPLLR K+G Y KDGEF PVS
Sbjct: 64  KEGKVVATHGDMQAEVNRGLNCIKGYFLSKIMYGKDRLETPLLRKKNGVYAKDGEFEPVS 123

Query: 122 WDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKLMKAGFRSNNIDPNARHC 181
           WD AFDVMA++ K  LK KGPT+VGMFGSGQWT+ EGYAA KLM+AGFRSNN+DPNARHC
Sbjct: 124 WDEAFDVMAQQCKRVLKEKGPTAVGMFGSGQWTIFEGYAATKLMRAGFRSNNLDPNARHC 183

Query: 182 MASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPVLWTRITDRRLSHPHVKV 241
           MASA   FMRTFG+DEPMGCYDDFEHADAFVLWGSNMAEMHP+LWTRI DRRL   HV+V
Sbjct: 184 MASAAYAFMRTFGMDEPMGCYDDFEHADAFVLWGSNMAEMHPILWTRIADRRLGFDHVRV 243

Query: 242 NVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVNWDFVNKHTHFKQAVTDI 301
            VLST+ HRS +LAD   +F P +DL I N+IAN+II+   VN DFV  HT F + VTDI
Sbjct: 244 AVLSTFTHRSMDLADIPMVFKPGTDLVILNYIANHIIKTGRVNEDFVRNHTKFVRGVTDI 303

Query: 302 GYGLRDDHPLQKKAKN-ANSGDVSDISFEEYKKSVAPYTVEKASEISGVSPDKLITLAKQ 360
           GYGLR D P++  A N A+      I FE +K+ V+ YT+EK + ++GV    L  LA+ 
Sbjct: 304 GYGLRPDDPVEVNAANSADPTKTEAIDFETFKEFVSEYTLEKTAAMTGVEAGFLEELAEL 363

Query: 361 YADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGNSPFSLTGQPSACGTAR 420
           YADP  KVMSLWTMG NQH RGVW   +VYN+HLLTGKI+ PGNSPFSLTGQPSACGTAR
Sbjct: 364 YADPKRKVMSLWTMGFNQHVRGVWANQMVYNIHLLTGKISEPGNSPFSLTGQPSACGTAR 423

Query: 421 EVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPGFHAVQQDRMLKDGVLNCYWV 480
           EVGTFAHRLPADM V NP+HR  AE++W++P G IPEKPG+HAVQQDRML DG LN YWV
Sbjct: 424 EVGTFAHRLPADMTVTNPEHRKHAEEIWRIPHGIIPEKPGYHAVQQDRMLHDGKLNFYWV 483

Query: 481 QCNNNMQAGPNINEERLPGYRNPENFIVVSDAYPTVTAQAADLVLPTAMWVEKEGAYGNA 540
           Q NNN+QAGPN   E   GYRNPENFIVVSDAYPT+TA +ADL+LP AMWVEKEGAYGNA
Sbjct: 484 QVNNNVQAGPNTKNETYLGYRNPENFIVVSDAYPTITAMSADLILPAAMWVEKEGAYGNA 543

Query: 541 ERRTQVWYQQVKTVGESHSDSWQVIEFSKRFKVEDVWPEELLAKAPQYRGKTLYDVLFKN 600
           ERRT VW+Q V+  GE+ SD WQ++EFSKRF  ++VWP E+L   P YRGKTLY+VL+K+
Sbjct: 544 ERRTHVWHQLVEASGEARSDLWQLVEFSKRFTTDEVWPAEILDANPAYRGKTLYEVLYKD 603

Query: 601 GQVDKFPLSE--ARELNDDAHHFGFYIQKGLFEEYAEFGRGHGHDLAPYDVYHQVRGLRW 658
             V KFPLSE  A   N ++  FGFY+QKGLFEEYA FGRGHGHDLAPYD YH+VRG+RW
Sbjct: 604 SDVGKFPLSEINADYKNQESSDFGFYLQKGLFEEYAAFGRGHGHDLAPYDAYHEVRGMRW 663

Query: 659 PVVDGKETKWRFKEGSDPYAKAGSGWDFYGKPDGKAWIISSPYEAPPEMPNEEYDLWLCT 718
           PVVDGKET WR++EG DPY K G G  FYG  DG+A II+ PYE P E P++E+D WL T
Sbjct: 664 PVVDGKETLWRYREGYDPYVKPGEGVKFYGNKDGRAVIIAVPYEPPAESPDQEFDTWLVT 723

Query: 719 GRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQARGLRRGDEVLISNSRGEVRVRVE 778
           GRVLEHWH+G+MT RVPELYKA P A CFM+ +DA+ RGL +G E+ I + RGE+R RVE
Sbjct: 724 GRVLEHWHSGSMTMRVPELYKAFPGARCFMNADDARKRGLNQGAEIRIVSRRGEIRSRVE 783

Query: 779 TRGRNKPPKGLVFVPFFDARILVNKLILDATDPLSKQTDFKKCPVKITKVA 829
           TRGRN+ P G++FVP+FDA  L+NK+ LDATDP+SKQTDFKKC VKI  VA
Sbjct: 784 TRGRNRMPPGVIFVPWFDASQLINKVTLDATDPISKQTDFKKCAVKIEPVA 834