Pairwise Alignments

Query, 829 a.a., periplasmic nitrate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 882 a.a., nitrate reductase large subunit from Agrobacterium fabrum C58

 Score =  301 bits (771), Expect = 1e-85
 Identities = 226/795 (28%), Positives = 354/795 (44%), Gaps = 118/795 (14%)

Query: 45  KAPCRFCGTGCSVLVGTQDGRVVATQGDPEAPVNKGLNCIKGYFLSKIMYGQDRLKTPLL 104
           K  C +CG GC V+    D  VV+ +GDP+ P N G  C KG  L++ +    RL  P +
Sbjct: 6   KTTCPYCGVGCGVIATVNDSGVVSVKGDPDHPANFGRLCSKGSALAETIDLDGRLLHPEI 65

Query: 105 RMKDGQYHKDGEFTPVSWDTAFDVMAEKWKASLKTKGPTSVGMFGSGQWTVMEGYAAVKL 164
             +             +WD A D++A ++  ++   GP SV  + SGQ    + Y A KL
Sbjct: 66  AGRRA-----------AWDEALDLVASRFSDAIAEHGPDSVAFYVSGQLLTEDYYLANKL 114

Query: 165 MKAGFRSNNIDPNARHCMASAVVGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPV 224
           MK    S NID N+R CM+S+V G  R FG D   G Y+D E AD  +L GSN+A  HPV
Sbjct: 115 MKGFIGSANIDTNSRLCMSSSVAGHRRAFGADTVPGTYEDMELADLVILTGSNLAWCHPV 174

Query: 225 LWTRITDRRLSHPHVKVNVLSTYYHRSFELADHGYIFHPQSDLAIANFIANYIIQNDAVN 284
           L+ R+   + + P +KV V+      S ++AD      P  D+A+   +  ++  + A++
Sbjct: 175 LYQRLAAAKAARPGMKVVVIDPRRTMSADIADMHLAIRPDGDVALFTGLLAHLFASSAID 234

Query: 285 WDFVNKHTHFKQAVTDIGYGLRDDHPLQKKAKNANSGDVSDISFEEYKKSVAPYTVEKAS 344
             +V  HT                                   FE   ++ + +++ + +
Sbjct: 235 RGYVENHT---------------------------------AGFEAATQAASEHSLPEIA 261

Query: 345 EISGVSPDKLITLAKQYADPNTKVMSLWTMGMNQHTRGVWMQSLVYNLHLLTGKIATPGN 404
           E +G++  +LI   + + +   K ++ ++ G+NQ   G    + + N HL TG+I  PG 
Sbjct: 262 EATGLTIAELIPFYELF-ERTEKTVTCYSQGVNQSESGTDKVNAIINCHLATGRIGRPGM 320

Query: 405 SPFSLTGQPSACGTAREVGTFAHRLPADMVVANPKHRAIAEKVWKLPEGTIPEKPGFHAV 464
            PFSLTGQP+A G  REVG  A+ L A M + N   R   ++ W  P   I +KPG  AV
Sbjct: 321 GPFSLTGQPNAMG-GREVGGLANMLAAHMSIENADDRDRVQRFWASP--AIAQKPGLKAV 377

Query: 465 QQDRMLKDGVLNCYWVQCNNNMQAGPNINEERLPGYRNPENFIVVSDAYP-TVTAQAADL 523
              R + DG +   W+   N + + P+     +     P  F+VVSD    T TA+ A +
Sbjct: 378 DMFRAVADGRIKALWIMATNPVVSMPDAGAVEVTIKACP--FVVVSDVMANTDTARHAHV 435

Query: 524 VLPTAMWVEKEGAYGNAERRTQVWYQQVKTVGESHSDSWQVIEFSKRFKVEDVW----PE 579
           +LP+  W EK+G   N+ERR       +   GE+ +D WQ+ E ++R   +  +    P 
Sbjct: 436 LLPSLGWGEKDGTVTNSERRISRQRSFLDAPGEAKADWWQMAEVARRMGFDAAFAYQQPS 495

Query: 580 ELLAKAPQYRGKTLYDVLFKNGQVDKFPLSEARELNDDAHHFGFYIQKGLFEEYAEFGRG 639
           E+ A+     G       F+N     F +                               
Sbjct: 496 EIFAEHAALSG-------FENAGRRDFDIGGIER-------------------------- 522

Query: 640 HGHDLAPYDVYHQVRGLRWPVVDGKETKWRFKEGSDPYAKAGSGWDFYGKPDGKAWIISS 699
                   D Y  +  ++WP     E +           +  +   FY   DGKA  I++
Sbjct: 523 --------DSYETMAPVQWPKAGAGEAE---------VTRFFANGRFY-HADGKARFIAT 564

Query: 700 PYEAPPE--MPNEEYDLWLCTGRVLEHWHTGTMTRRVPELYKAVPDALCFMHHEDAQARG 757
              A PE    + +Y L L TGR+ + WHT T T +   L   + +    +H  DAQA G
Sbjct: 565 ---ALPETDRTSADYPLTLNTGRIRDQWHTMTRTGKSARLTAHIAEPFAEIHPRDAQALG 621

Query: 758 LRRGDEVLISNSRGEVRVRVETRGRNKPPKGLVFVPF-----FDARILVNKLILDATDPL 812
           ++  D V + +  G+V +R     R    +G VF P      F +R  ++ ++   TDP 
Sbjct: 622 IKSADLVELESPHGKVLLRALVSERQ--ARGSVFAPMHWNDQFASRARIDVVVAPVTDPH 679

Query: 813 SKQTDFKKCPVKITK 827
           S Q   K   V++T+
Sbjct: 680 SGQPASKNVGVRVTR 694