Pairwise Alignments

Query, 583 a.a., nitrate/nitrite two-component system sensor histidine kinase NarQ from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 67.0 bits (162), Expect = 1e-15
 Identities = 77/280 (27%), Positives = 118/280 (42%), Gaps = 24/280 (8%)

Query: 303 KPLILQEGKPSGAVMLQTPLTLDGHHLGFLYWEAGSPEPDRALIDNFALIL-------SR 355
           K LI +    S A  L   L L    L    +   +  P   +++   L++       SR
Sbjct: 6   KTLIARSASRSNARRLILALCLGSLLLSLWAYHFSAALPLLVMLNLTTLVVVGLQQWHSR 65

Query: 356 AIYYNQAQRQAEQLLLMEE--RATIARELHDSLAQSLSYLKIQLTLLKRSVTPLKSDGDL 413
                Q Q  A++LL ++E  R  ++RELHD + Q L+  K+Q   LKR + P       
Sbjct: 66  KAIKFQPQELADRLLQVQENERHRLSRELHDDIGQLLTAAKLQSEWLKRRL-PEDLQSQC 124

Query: 414 SKTENIIREIDKGLSDAYTQLR-ELLTTFRLTLTEGSFGQSLLGML--TQLSGQTDAKIE 470
           +   N + E    + D    L    L +  L   E S    LL  L  TQ+    + +  
Sbjct: 125 TVLCNTLNETLAKVRDVSAILNPRQLASLGL---EASLRAHLLKTLENTQVCWSLECQQR 181

Query: 471 LNNALSSIALDAHQQVHLVQLIREATINAIKHAKATKIKVNCQEQQGRVQVTIEDDGVGF 530
           L      +A+ A +      + +EA  N ++HA+A  + V  Q     + + I DDG GF
Sbjct: 182 LTGIPEEMAVAAFR------ITQEAVTNMLRHAQARNLLVRLQRLPEGLSLFISDDGQGF 235

Query: 531 D--LQDHKINHYGMSIMQERAARLRGELKVESAPGKGCKV 568
              +        GM+ M ER  +L G L V S PGKG ++
Sbjct: 236 SPAINPGLEGQRGMAGMSERIDQLGGSLSVSSQPGKGTRI 275