Pairwise Alignments

Query, 583 a.a., nitrate/nitrite two-component system sensor histidine kinase NarQ from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Nitrate/nitrite sensor protein (EC 2.7.3.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  152 bits (384), Expect = 4e-41
 Identities = 158/622 (25%), Positives = 270/622 (43%), Gaps = 79/622 (12%)

Query: 17  SLTRTMAKAMLLILFLSALTTGVAIVTLASSLNDAEAVNVSGSMRMQSYRLAYDIQTQSH 76
           SL+  + +    +L ++  + G+ +         A AVN +G MRMQ++RL    Q Q  
Sbjct: 8   SLSTKLVRIGAGLLLVALASIGLTLWVTWQLEGGAAAVNEAGRMRMQTWRLTSVAQAQRA 67

Query: 77  --DYKAHIFLFENSLYSPSMLALLDWT----VPSD--IQQDYYQLIERWHELKKVLNSD- 127
             +  A +  F+ SL   ++L   D +    VP D  + +++  +   W + + +   D 
Sbjct: 68  PAEVAALVQRFDQSL---ALLRRGDASRPLFVPRDEAVAREFATVEALWQKQRPLWLQDT 124

Query: 128 --QKAQYLDQVAPFVSLVDGFVLKLQRFSERKLIALAAVGS---FGLGGIFAVSLFVVYY 182
             + AQ L     FV  +D  VL +    E +L A  A+ +   F +  +  V   V+ Y
Sbjct: 125 PPEPAQVLAAADTFVEAIDALVLAI----EHQLSAFTAILNLFQFLMMALAIVGAVVMLY 180

Query: 183 IREQ-VVRPLNAMVDASEKIKNRNFDVMLEETSSTEMGILSRTFNSMAGDLGKLYRGLEH 241
                V+ PL  +     ++++ +F   +E  +  E G ++  FN MA  L  +Y GLE 
Sbjct: 181 TGYMYVINPLAHLRQGLRRLESGDFKARVEVDTLDEFGQVAGGFNRMASTLQSMYAGLES 240

Query: 242 AVNEKTNKLQMANQSLQVLYHSSQELTA-------SRITASNFQTILR------------ 282
            V  KT  ++     L  LY  S  +         SR  A   + +++            
Sbjct: 241 QVETKTRHIEAQRARLATLYEVSAFMAQAGSIEELSRGFAQRVRAVVKADAVAVRWSDEA 300

Query: 283 --HWVALEGICALRLEIEEEAG--------------------------KPLILQEGKPSG 314
              ++ L   C  +  +EEE                            +  +    +   
Sbjct: 301 SQRYLMLASDCFPQELVEEERSLLAGACACGSLQPDARTRVIPIHSHDEASVRHCARAGF 360

Query: 315 AVMLQTPLTLDGHHLG----FLYWEAGSPEPDRALIDNFALILSRAIYYNQAQRQAEQLL 370
             ++  P+ L    LG    F   +A     +  L+D  A  L+ A+   +A     +  
Sbjct: 361 ETLVSVPVRLQNRLLGEIDLFYRSQASLSTGETELLDALASHLANALESLRASALEREAA 420

Query: 371 LMEERATIARELHDSLAQSLSYLKIQLTLLKRSVTPLKSDGDLSKTENIIREIDKGLSDA 430
           + EERA IARELHDS+AQSL++LKIQ+ LL+ +       G  ++  + + E+D+GL ++
Sbjct: 421 VGEERALIARELHDSIAQSLAFLKIQVQLLRTAA----GKGQDARVMSTLDELDEGLRES 476

Query: 431 YTQLRELLTTFRLTLTEGSFGQSLLGMLTQLSGQTDAKIELNNALSSIALDAHQQVHLVQ 490
              +RELL  FR         ++L   L +   QT    +L+     + L A  QV ++ 
Sbjct: 477 INDVRELLVHFRTRTNTDDIERALQETLQKFQHQTGLPAKLHVEGHGLPLPADVQVQVLH 536

Query: 491 LIREATINAIKHAKATKIKVNCQEQQGRVQVTIEDDGVGFDLQD-HKINHYGMSIMQERA 549
           +++E+  N  KHA A  ++++   +    +  + DDG GFD  D    +H G+ IM+ERA
Sbjct: 537 VLQESLSNVRKHAGAGHVQLDV-FKGAHWRFRVCDDGAGFDALDASDDSHVGLKIMRERA 595

Query: 550 ARLRGELKVESAPGKGCKVVLT 571
           A +   + V S PG+G  V LT
Sbjct: 596 ALIGARVDVSSDPGQGTAVTLT 617