Pairwise Alignments

Query, 583 a.a., nitrate/nitrite two-component system sensor histidine kinase NarQ from Vibrio cholerae E7946 ATCC 55056

Subject, 598 a.a., Nitrate/nitrite sensor protein (EC 2.7.3.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  206 bits (525), Expect = 2e-57
 Identities = 164/586 (27%), Positives = 281/586 (47%), Gaps = 46/586 (7%)

Query: 21  TMAKAMLLILFLSALTTGVAIVTLASSL-----NDAEAVNVSGSMRMQSYRLAYDIQTQS 75
           T+   + LI+ LS    GVA + ++  L       A A+N +GS+RMQSYRL   +   +
Sbjct: 10  TLVNQLALIVMLST-AIGVAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLDA 68

Query: 76  HDYKAHIFLFENSLYSPSMLALLDWTVPSDIQQDYYQLIER-WH-ELKKVLNSDQKAQYL 133
            D K  +   E + +SP +    +     D QQ   + ++  WH EL   L   Q A  +
Sbjct: 69  KDQKL-LDEMEQTAFSPELTRAAE----RDGQQKQLKALQDYWHNELSPGLQHAQNAHAV 123

Query: 134 -DQVAPFVSLVDGFVLKLQRFSERKLIALAAVGSFGLGGIFAVSLFVVYYIREQVVRPLN 192
            + V  FV+ +D  V      +E ++  +  V       +  + +F + ++R ++++P  
Sbjct: 124 AEDVTRFVAGLDRLVTSFDHTTELRIERVVLVHRVMAIFMALLLVFTIIWLRVRLLQPWK 183

Query: 193 AMVDASEKIKNRNFDVMLEETSSTEMGILSRTFNSMAGDLGKLYRGLEHAVNEKTNKLQM 252
            ++  +  +  R+F      +   EM  L    N+M+ +L + Y  LE  V EKT  L+ 
Sbjct: 184 QLLSMARAVSQRDFTQRANISGRNEMAALGSALNNMSEELAESYAVLEQRVQEKTAGLEH 243

Query: 253 ANQSLQVLYHSSQELTASRITASNFQTILRHWVALEGICALRLEIE-------------- 298
            NQ L  L+ +++ L +          +L     L  +  + L +               
Sbjct: 244 KNQILSFLWQANRRLHSQAPLCERLSPVLNGLQNLTQLHDIELRVYDLEDEDNHQEFTCQ 303

Query: 299 -----EEAGKPLILQEGKP--SGAVMLQTPLTLDGHH-----LGFLYWEAGSPEPDRALI 346
                ++ G  L  +   P  +G   L+  LT D H      L  L +        + L+
Sbjct: 304 SDISCDDKGCHLCPRSALPMINGGTTLKWRLT-DSHTQYGILLATLPYGRHLSHDQQQLV 362

Query: 347 DNFALILSRAIYYNQAQRQAEQLLLMEERATIARELHDSLAQSLSYLKIQLTLLKRSVTP 406
           D     L+  +  ++ Q + +QL++MEERATIARELHDS+AQSLS +K+Q++ L+     
Sbjct: 363 DTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQ----- 417

Query: 407 LKSDGDLSKTENIIREIDKGLSDAYTQLRELLTTFRLTLTEGSFGQSLLGMLTQLSGQTD 466
           ++ D     +  ++ +I   L+ ++ QLRELLTTFRL LTE     +L     + S +  
Sbjct: 418 MQGDVLPESSRELLSQIRNELNCSWAQLRELLTTFRLQLTEPGLRPALEASCQEFSARFG 477

Query: 467 AKIELNNALSSIALDAHQQVHLVQLIREATINAIKHAKATKIKVNCQEQQGRVQVTIEDD 526
             ++L+  L    + +HQ +HL+Q+ REA  NA+KH+ A  + V   +   +V++ ++D+
Sbjct: 478 FTVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSHADDVVVTVTQCGKQVKLKVQDN 537

Query: 527 GVGFDLQDHKINHYGMSIMQERAARLRGELKVESAPGKGCKVVLTY 572
           G G      + NHYGM IM++RA  LRG+ +V      G +V +T+
Sbjct: 538 GCGVPENAERSNHYGMIIMRDRAQSLRGDCQVRRRETGGTEVTVTF 583