Pairwise Alignments

Query, 583 a.a., nitrate/nitrite two-component system sensor histidine kinase NarQ from Vibrio cholerae E7946 ATCC 55056

Subject, 566 a.a., sensory histidine kinase in two-component regulatory system with NarP (NarL) (NCBI) from Escherichia coli BW25113

 Score =  420 bits (1079), Expect = e-122
 Identities = 242/566 (42%), Positives = 351/566 (62%), Gaps = 12/566 (2%)

Query: 14  VRHSLTRTMAKAMLLILFLSALTTGVAIVTLASSLNDAEAVNVSGSMRMQSYRLAYDIQT 73
           V+  ++ ++A+A   I+ LS L+TG+A++TLASSL DAEA+N++GS+RMQSYRL YD+Q+
Sbjct: 3   VKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAINIAGSLRMQSYRLGYDLQS 62

Query: 74  QSHDYKAHIFLFENSLYSPSMLALLDWTVPSDIQQDYYQLIERWHELKKVLNSDQKAQYL 133
            S    AH  LF+ +L+SP +  L  W VP  ++  Y  L   W E+   L+      Y 
Sbjct: 63  GSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHLNANWLEMNNRLSKGDLPWYQ 122

Query: 134 DQVAPFVSLVDGFVLKLQRFSERKLIALAAVGSFGLGGIFAVSLFVVYYIREQVVRPLNA 193
             +  +V+ +D FVL LQ ++ERK++ + A+   G  GIF +  F +  IR QVV PLN 
Sbjct: 123 ANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIGIFTLVFFTLRRIRHQVVAPLNQ 182

Query: 194 MVDASEKIKNRNFD-VMLEETSSTEMGILSRTFNSMAGDLGKLYRGLEHAVNEKTNKLQM 252
           +V AS++I++  FD   L+     E+G+L++TFN M+ +L KLYR LE +V EKT  L  
Sbjct: 183 LVTASQRIEHGQFDSPPLDTNLPNELGLLAKTFNQMSSELHKLYRSLEASVEEKTRDLHE 242

Query: 253 ANQSLQVLYHSSQELTASRITASNFQTILRHWVALEGICALRLEIEEEAGKPLILQEGKP 312
           A + L+VLY  SQ L  S+I    F+ IL+  +  +   A  LE+    G+   + EG+P
Sbjct: 243 AKRRLEVLYQCSQALNTSQIDVHCFRHILQ--IVRDNEAAEYLEL--NVGENWRISEGQP 298

Query: 313 SGAVMLQ-TPLTLDGHHLGFLYWEAGSPEPDRALIDNFALILSRAIYYNQAQRQAEQLLL 371
           +  + +Q  P+T+     G L+W+         L+++ + +L R +Y+NQAQ+  +QLLL
Sbjct: 299 NPELPMQILPVTMQETVYGELHWQNSHVSSSEPLLNSVSSMLGRGLYFNQAQKHFQQLLL 358

Query: 372 MEERATIARELHDSLAQSLSYLKIQLTLLKRSVTPLKSDGDLSKTENIIREIDKGLSDAY 431
           MEERATIARELHDSLAQ LSYL+IQLTLLKRS+       D +  ++I+ +  + L+DAY
Sbjct: 359 MEERATIARELHDSLAQVLSYLRIQLTLLKRSIPE-----DNATAQSIMADFSQALNDAY 413

Query: 432 TQLRELLTTFRLTLTEGSFGQSLLGMLTQLSGQTDAKIELNNALSSIALDAHQQVHLVQL 491
            QLRELLTTFRLTL +     +L  ML  L  QT AK+ L+  L ++ALDA  QVHL+Q+
Sbjct: 414 RQLRELLTTFRLTLQQADLPSALREMLDTLQNQTSAKLTLDCRLPTLALDAQMQVHLLQI 473

Query: 492 IREATINAIKHAKATKIKVNC-QEQQGRVQVTIEDDGVGFDLQDHKINHYGMSIMQERAA 550
           IREA +NA+KHA A++I V+C     G   V I D+G+G         HYG++IM+ERA 
Sbjct: 474 IREAVLNAMKHANASEIAVSCVTAPDGNHTVYIRDNGIGIGEPKEPEGHYGLNIMRERAE 533

Query: 551 RLRGELKVESAPGKGCKVVLTYQQSE 576
           RL G L      G G  V ++++ +E
Sbjct: 534 RLGGTLTFSQPSGGGTLVSISFRSAE 559