Pairwise Alignments

Query, 583 a.a., nitrate/nitrite two-component system sensor histidine kinase NarQ from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., Sensor histidine kinase LiaS from Alteromonas macleodii MIT1002

 Score = 78.2 bits (191), Expect = 6e-19
 Identities = 66/208 (31%), Positives = 100/208 (48%), Gaps = 17/208 (8%)

Query: 369 LLLMEERATIARELHDSLAQSLSYLKIQLTLL----KRSVTPLKSDGDLSKTENIIREID 424
           LL  +ER  +ARELHD++ Q L+ +K    +L    +RSV  L +          ++ + 
Sbjct: 209 LLQEQERNYLARELHDNVGQLLTTIKAHAYILVNAKERSVVELSAQK--------VQVMS 260

Query: 425 KGLSDAYTQLRELLTTFRLTLTEGSFGQSLLGML-TQLSGQTDAKIELNNALSSIALDAH 483
             +SDA  +L   L    L L   S   SL  ++  Q   Q D K +++  L     D  
Sbjct: 261 HQISDAIRKLTAHLHP--LVLDRVSLQSSLERLVYEQEVAQPDTKWDVSINLKRYQEDNE 318

Query: 484 QQVHLVQLIREATINAIKHAKATKIKVNCQEQQGRVQVTIEDDGVGFDLQDHKINHYGMS 543
           + +HL +  +EA  N IKHAKATK+ +       RV V ++D+G G  L +H + + GMS
Sbjct: 319 RDIHLYRFAQEAINNVIKHAKATKVSIQIYGDTHRVSVMVKDNGRG--LGNHIVENIGMS 376

Query: 544 IMQERAARLRGELKVESAPGKGCKVVLT 571
            M+ RA  +     V S    G  V L+
Sbjct: 377 SMRSRARCIGANCSVTSPDDGGVAVSLS 404



 Score = 25.8 bits (55), Expect = 0.004
 Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 11/100 (11%)

Query: 173 FAVSLFVVYYIREQVVRPLNAMVDASEKIKNRNFDVMLEETSSTEMGILSRTFNSMAGDL 232
           F + LF +    +Q + PLN + DA  +++       L  +  TEM   +R  +      
Sbjct: 134 FVLLLFTLKVAVKQRLVPLNQLADALSELREGKESQPLPHSDITEM---NRVLDQ----- 185

Query: 233 GKLYRGLEHAVNEKTNKLQMANQSLQVLYHSSQELTASRI 272
              ++ L++A+  K  +L   ++ L +L    +   A  +
Sbjct: 186 ---FKHLQNALKSKEKQLIKIDKQLALLQEQERNYLAREL 222