Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 215 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  169 bits (429), Expect = 3e-47
 Identities = 92/207 (44%), Positives = 128/207 (61%), Gaps = 2/207 (0%)

Query: 4   RVLLVDDHPLMRRGINQLLSFEEEFEVVAEAGSGAEAIALAHDLQPDLILLDLNMKGMSG 63
           R+LLVDDHP+MR G+ Q+L  E++  VV EAG+G EA+     LQPDL+LLD NM  M+G
Sbjct: 8   RILLVDDHPMMRHGMRQMLELEDDLHVVGEAGNGQEALDQIATLQPDLVLLDNNMPHMNG 67

Query: 64  LDTLTALRTDECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAMQGE 123
           L+TL  LR       V++ TVSD+  DI   ++  A+GYLLKD EP+ +V  ++ A+QG 
Sbjct: 68  LETLRRLRAMNYAGKVLLFTVSDAEDDIRDALRLDANGYLLKDMEPELVVEFIRDALQGA 127

Query: 124 KAFSESVERYLLNREHTSNPFEA--LTEREMQIMSEVAKGYRNRQIADRLFISESTVKVH 181
              S  + R L     +  P  A  LTERE Q++  +A GY N+ I  +L I+E TVKVH
Sbjct: 128 LVISPGLTRVLAQALRSPQPHAAVELTERERQVLRTIAGGYSNKVIGHKLGITEGTVKVH 187

Query: 182 MKSLLKKLDVPSRTAATILYLERYANA 208
           +K++L KL + SR  A +  +E    A
Sbjct: 188 VKNVLHKLGLRSRVEAAVWAMEHLRQA 214