Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 213 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  115 bits (288), Expect = 6e-31
 Identities = 66/200 (33%), Positives = 113/200 (56%), Gaps = 3/200 (1%)

Query: 4   RVLLVDDHPLMRRGINQLLSFEEEFEVVAEAGSGAEAIALAHDLQPDLILLDLNMKGMSG 63
           RVL+VDDH L+R GI ++L+  +  +VV +A SG E++  A +L+PD++L+D+ M G+ G
Sbjct: 3   RVLVVDDHDLVRTGITRMLADIDGLQVVGQAESGEESLIKARELKPDVVLMDVKMPGIGG 62

Query: 64  LDTLTALRTDECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAMQGE 123
           L   T L     D  VV++TV +       L++AGA GYL K     ++V  ++    G+
Sbjct: 63  LGATTKLLRSHPDIKVVVVTVCEEDPFPTRLLQAGAAGYLTKGAGLAEMVQAIRLVFAGQ 122

Query: 124 KAFSESVERYLLNREH---TSNPFEALTEREMQIMSEVAKGYRNRQIADRLFISESTVKV 180
           +  S  + + L  +     + +PF+ L+ERE+QI   +    + + I+D+L +S  TV  
Sbjct: 123 RYISPQIAQQLAIKSFQPVSDSPFDVLSEREIQIALMIVGCQKVQTISDKLCLSPKTVNT 182

Query: 181 HMKSLLKKLDVPSRTAATIL 200
           +   + +KL + S    T+L
Sbjct: 183 YRYRIFEKLAISSDVELTLL 202