Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 238 a.a., Two-component transcriptional response regulator, NarL/FixJ family from Sphingobium sp. HT1-2

 Score =  129 bits (325), Expect = 3e-35
 Identities = 76/200 (38%), Positives = 113/200 (56%), Gaps = 4/200 (2%)

Query: 5   VLLVDDHPLMRRGINQLLSFEEEFEVVAEAGSGAEAIALAHDLQPDLILLDLNMKGMSGL 64
           +L+VDDH L+R G+  +L+ + +  +V EA +G  A+     L+PD++L+DL M  M GL
Sbjct: 38  ILVVDDHALLREGVRAMLATQADMRIVGEADNGRRAVEEYARLRPDIVLMDLQMAEMPGL 97

Query: 65  DTLTALRTDECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAMQGEK 124
           D + A+R    DA +++LT           ++AGA GYLLK +   QL+  ++    G K
Sbjct: 98  DAIAAIRAIHPDARIIVLTTYSGDGRAIKALRAGAMGYLLKASLRKQLLDAIRSVHLGGK 157

Query: 125 AFSESVERYLLNREHTSNPFEALTEREMQIMSEVAKGYRNRQIADRLFISESTVKVHMKS 184
               +V   +    H     + LTERE+ ++S  A G  N+Q+A RL ISE TVK HMKS
Sbjct: 158 HLDATVATAI--ALHVLE--DPLTEREIAVLSLAAWGNSNKQVAARLDISEETVKGHMKS 213

Query: 185 LLKKLDVPSRTAATILYLER 204
           +  KLD   RT A  L ++R
Sbjct: 214 IFSKLDATDRTHAVTLAIKR 233