Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  116 bits (290), Expect = 4e-31
 Identities = 67/199 (33%), Positives = 112/199 (56%), Gaps = 11/199 (5%)

Query: 4   RVLLVDDHPLMRRGINQLLSFEEEFEVVAEAGSGAEAIALAHDLQPDLILLDLNMKGMSG 63
           +V+L DDH ++R GI  LL  E E EV+ EA +G EAI    +++PDL+++D+ M  M+G
Sbjct: 5   KVVLADDHMVVRSGIKNLLENEGEVEVIGEASNGEEAIEKVKEVKPDLLIIDIRMPVMNG 64

Query: 64  LDTLTALRTDECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAMQGE 123
           LD    L + +     +IL++ D    I   ++ GA GYLLKDT  D+ +  ++   QG 
Sbjct: 65  LDATRKLTSSQQPTKSLILSMHDDEDYILQSIECGAAGYLLKDTSKDEFMKAIRTIHQGG 124

Query: 124 KAFSESVERYLL-----------NREHTSNPFEALTEREMQIMSEVAKGYRNRQIADRLF 172
           + FS  + + L+           ++  T      +T+RE QI+  ++ G  N++IA++L 
Sbjct: 125 QYFSGDISQVLVKSYLNVKDKKSSKSITPANDYDITKREKQILKMISDGTSNKEIAEQLG 184

Query: 173 ISESTVKVHMKSLLKKLDV 191
            S  T++ H  +++KKL V
Sbjct: 185 KSIRTIETHRFNIMKKLKV 203