Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., HTH-type transcriptional repressor CytR from Xanthobacter sp. DMC5

 Score =  114 bits (284), Expect = 5e-30
 Identities = 98/333 (29%), Positives = 154/333 (46%), Gaps = 10/333 (3%)

Query: 13  ATVTSKDVAKLAGVSQSTVSRVFVPGSS--VSEKTKQKVFEAAKVLNYRPNAFARSLTTN 70
           A VT  DVA+ AGV  ST SRV    +S  V E+T+ ++ + A+ + Y  N  AR L T 
Sbjct: 15  ARVTLADVARAAGVDMSTASRVLRGEASQRVREETRVRILKIAEEMQYLANPLARGLRTQ 74

Query: 71  ESKLIGLVFPDADYPIHMKTLQLISSELQQVGYSAVLIPWQVDEQDNHSIPNIFQ-YRVD 129
            +  +G+V P  D P+    ++    E  + GYS +LI  +   +   +I  I +  RVD
Sbjct: 75  RTDTLGIVVPQLDNPVFASAIRGAELEAAERGYS-LLISHREPGETATTIAKISRTNRVD 133

Query: 130 GVIAASATFNKTLYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGAQ 189
           G++ AS   ++ L  +     +P V   R++ G   S V+ D+  A R+  + L   G +
Sbjct: 134 GLLVASLDDDEVLRTDLAAARVPFVLMNRILPGAPLS-VVLDSRAAARKGVEHLTALGHR 192

Query: 190 SAVYLTGEVPTFTNDERQQGFCSEFKSL-TGFTPPVV-KATYDYTGSLDTIRRLIADSSR 247
              +L G    F   ER QG+    ++    F   +V  A Y   G    +R L+     
Sbjct: 193 RIAHLAGREGGFNARERLQGYRDGLEAAGIAFDEALVGVAGYTAEGGTQAMRALL--PQH 250

Query: 248 PAAIFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRLA 307
           P A+  AT   A   M     E  LRIP+DI VIG  + P    L   LT+ A   + + 
Sbjct: 251 PTAVLAATLVSAAGAM-ATLHEAGLRIPEDISVIGLHDAPVAGMLYPALTSVAMPTEEMG 309

Query: 308 RESVKIIVDQITTRNQSLVKLMVPTKLIQRKST 340
           R +  +++  +   + + V  + P  L+ R ST
Sbjct: 310 RVAAGLLIRALGGEDPAPVAPLPPGALVVRGST 342