Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., Transcriptional regulator, LacI family from Variovorax sp. SCN45

 Score =  122 bits (307), Expect = 1e-32
 Identities = 97/334 (29%), Positives = 156/334 (46%), Gaps = 4/334 (1%)

Query: 10  SEKATVTSKDVAKLAGVSQSTVSRVFVPG--SSVSEKTKQKVFEAAKVLNYRPNAFARSL 67
           S  ATVT +DVA+ AGV  STVSR   P   S +SE+  + V EAA+ L YRPN  A +L
Sbjct: 8   SSSATVTIRDVARAAGVHVSTVSRALSPEKRSLISEEVLRVVEEAAQRLGYRPNRAASAL 67

Query: 68  TTNESKLIGLVFPDADYPIHMKTLQLISSELQQVGYSAVLIPWQVDEQDNHSIPNIFQYR 127
            T  +  IG++ PD    +    LQ I +     GY   +            +  +   R
Sbjct: 68  RTGRTHTIGVLVPDITNAVFPPILQGIEASAAARGYFVFVTNVADPALARPVLERMLAQR 127

Query: 128 VDGVIAASATFNKTLYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAG 187
           VDGV+ A+AT +  L +   +  +  V   R  E  +   V+SD+  A + A   L   G
Sbjct: 128 VDGVVMATATRDDPLVDFVAKAGMTAVLVNRADETGRLPAVVSDDRLAMKLAVDHLVALG 187

Query: 188 AQSAVYLTGEVPTFTNDERQQGFCSEFKSLTGFTPPVVK-ATYDYTGSLDTIRRLIADSS 246
            +   +L G     T   R+ G     +        VV+ A+Y        +++++   +
Sbjct: 188 HKRIAHLAGPQTIPTGVGRRLGVEQALRDHRMKPFRVVECASYSREAGALAMKQMLEAGA 247

Query: 247 RPAAIFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRL 306
            P A+ C  D +A+   D  R E  LR+P DI V G +++P  + +   LTT     + L
Sbjct: 248 APQAVVCCNDLVALGAYDALR-EAGLRVPQDISVTGHNDMPLVDMVDPPLTTIRLPHREL 306

Query: 307 ARESVKIIVDQITTRNQSLVKLMVPTKLIQRKST 340
              + +++ D+I  R+ S   +++  +L+ R+ST
Sbjct: 307 GWRAAEMLFDEIDGRSMSASTVVLRPELVVRQST 340