Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., KEGG: LacI family transcriptional regulator from Variovorax sp. SCN45

 Score =  112 bits (280), Expect = 1e-29
 Identities = 87/328 (26%), Positives = 145/328 (44%), Gaps = 4/328 (1%)

Query: 15  VTSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKL 74
           VT +DVA+ A VS +T SR     S  +  T++ V + A  L YR N FAR+L T  S+L
Sbjct: 3   VTLRDVARAADVSIATASRALAGSSLTNHATQKHVIQVAAALGYRTNTFARALKTKRSRL 62

Query: 75  IGLVFPDADYPIHMKTLQLISSELQQVGYSAVL-IPWQVDEQDNHSIPNIFQYRVDGVIA 133
           IGL   + +         ++ S +Q +GY  +L I     EQ+      +  + VDG+IA
Sbjct: 63  IGLTVHNLENASFQVLASVVQSRMQALGYQVILSISADDPEQERDIFRTLVDHSVDGLIA 122

Query: 134 ASATFNKTLYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGAQSAVY 193
                N       E  +IP++   R VEG     V++ + +      + L   G +    
Sbjct: 123 VPNGANGAQLLAMEHADIPVICAVRRVEGAMLESVLAGDLDGAYAGTRHLLDLGHRRIGL 182

Query: 194 LTGEVPTFTNDERQQGFCSEFKSLTGFTPPVVKATYDYTGSLDTI--RRLIADSSRPAAI 251
           + G   T +  ER  G+    +       P +  T  Y      +    L++  + P AI
Sbjct: 183 IVGPGETTSGKERLAGYKRAMQEAGLPVDPALIQTGRYAPETGVVAANALLSMPAPPTAI 242

Query: 252 FCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRLARESV 311
           F A    ++ V+ +   E  L IPDD+ ++ +++ P  EW    ++        +A  +V
Sbjct: 243 FVANHESSVGVLRVVS-ERGLLIPDDLSLLFYEDSPWFEWQRPAISVVDSGATEMANLAV 301

Query: 312 KIIVDQITTRNQSLVKLMVPTKLIQRKS 339
             +V ++     S  +  V ++LIQR S
Sbjct: 302 DRLVQRLGGVANSGREYRVGSRLIQRAS 329