Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  125 bits (315), Expect = 1e-33
 Identities = 91/328 (27%), Positives = 156/328 (47%), Gaps = 6/328 (1%)

Query: 16  TSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKLI 75
           T KDVA+LAGVS +TVSR  +    VS  T+++V EA     Y PN+ AR+L  NESK I
Sbjct: 3   TMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTI 62

Query: 76  GLVFPDADYPIHMKTLQLISSELQQVGYSAVL-IPWQVDEQDNHSIPNIFQYRVDGVIAA 134
             + PD   P   + ++ I     + GY  +L    Q   ++N  +  +F  + DG++  
Sbjct: 63  VAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLL 122

Query: 135 SATFNKTLYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGAQSAVYL 194
                  + +  ++   P+V         +   V  DN  +  +A   L Q G +    +
Sbjct: 123 GTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQI 182

Query: 195 TGEVPTFTNDERQQGFCSEFKSLTGFTPPVVKATY-DYT--GSLDTIRRLIADSSRPAAI 251
           +G         R QG+    +   G T      T+ D+T       +R+L+A   +P AI
Sbjct: 183 SGPQHAALCQFRHQGYQQALRR-AGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTAI 241

Query: 252 FCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRLARESV 311
           FC  D +A+  +  A+    LR+P D+ V+GFD+I   ++    LTT +Q    + R+++
Sbjct: 242 FCHNDTMAIGAIQEAK-RLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAM 300

Query: 312 KIIVDQITTRNQSLVKLMVPTKLIQRKS 339
            ++++ +   +      ++ TKL+ R+S
Sbjct: 301 LMMLELLRGHDVRAGSRLLETKLVVRES 328