Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., LacI family DNA-binding transcriptional regulator from Pantoea agglomerans CFBP13505 P0401

 Score =  159 bits (403), Expect = 8e-44
 Identities = 105/313 (33%), Positives = 166/313 (53%), Gaps = 7/313 (2%)

Query: 8   MHSEKATVTSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSL 67
           M   KA V+++DVA  AGVS+S VSR F PG+SVS+ T+Q+V +AA+ L Y  N  AR L
Sbjct: 1   MQQLKAVVSAQDVADRAGVSRSAVSRTFTPGASVSDATRQRVMKAAEELGYHVNHLARGL 60

Query: 68  TTNESKLIGLVFPDADYPIHMKTLQLISSELQQVGYSAVLIPW-QVDEQDNHSIPNIFQY 126
             N S ++ L+  + D P     ++ ++  LQ+ G  A+LI   + D + + ++     +
Sbjct: 61  VRNRSGIVCLIASEVDTPYRASLVRWMTQYLQEAGKVAMLINTDRSDARVSAALQQAINF 120

Query: 127 RVDGVIAASATFNKTLYEECEEF--NIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLH 184
           R D  I  S   +  +   C +   ++ ++     + GT S  +  D+  A   A     
Sbjct: 121 RADASIILSGMPDSGITRLCYKHGQHLVLINRDESLPGTLS--INLDSRPAAEMAVNAFV 178

Query: 185 QAGAQSAVYLTGEVPTFTNDERQQGFCSEFKSLTGFTPPVVK-ATYDYTGSLDTIRRLIA 243
           +AG     ++     T +  +R+  F +  + + G T  V +  T  Y       +RL+ 
Sbjct: 179 RAGCSRIAFVNSLAGTPSLLKREADFLAAAQKV-GVTVQVEQFGTTSYESGQILAQRLLT 237

Query: 244 DSSRPAAIFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDF 303
              RP A++CATD LA   MD AR  F+LRIPDD+ +IG DNI Q+ W SY LTTFAQ  
Sbjct: 238 RKVRPDAVYCATDLLACGFMDEARHRFALRIPDDLCLIGHDNIAQSGWASYNLTTFAQPV 297

Query: 304 KRLARESVKIIVD 316
           ++ AR+++  +V+
Sbjct: 298 EQFARDAIAWLVE 310