Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., LacI family DNA-binding transcriptional regulator from Serratia liquefaciens MT49

 Score =  127 bits (320), Expect = 3e-34
 Identities = 105/333 (31%), Positives = 155/333 (46%), Gaps = 14/333 (4%)

Query: 16  TSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKLI 75
           T+ DVA  AGVS+ TVSR F  G+S+S +  Q+V  AA+ L YRPN  ARSL+   +++I
Sbjct: 17  TASDVAARAGVSKWTVSRAFTDGASISPQAMQRVQTAARELGYRPNLLARSLSKKSTRII 76

Query: 76  GLVFPDADYPIHMKTLQLISSELQQVGYSAVLIPWQVDEQDNHSIPNIF-QYRVDGVIAA 134
           GLV  +   P     L  ++ +LQ  GY A+L+     E D  S+  +  Q +VDG++  
Sbjct: 77  GLVADELKNPHIFTLLDEVTRQLQSRGYMALLLN-ITSEHDYESVLTLADQMQVDGLLFL 135

Query: 135 SATFNKTLYEECEEFN-IPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGAQSAVY 193
               N  L    ++ + IP+V   R  E      + +  Y+AG    +LL Q       Y
Sbjct: 136 GTLLNDRLISLAQDIHRIPLVVLYRYSESPYIQVLATHGYQAGFDIGELLLQQDYPRMGY 195

Query: 194 LTGEVPTFTNDERQQGFCSEFKSLTGFTPPVVKAT-YDYTGSLDTIRRLIADS---SRPA 249
           L G +   T   R  GF +           V++A  Y     ++     +A +    R  
Sbjct: 196 LAGPISESTQLRRLDGFRAALAQQQREVNLVLQAPHYQRLCGMEAFSAYLAATPAEQRID 255

Query: 250 AIFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRLARE 309
           AIFC  D LA+ V+D  R          I V+GFD+I      SYQLTT+ Q  ++L  +
Sbjct: 256 AIFCENDILAVGVIDAIRATPGCA---PIAVVGFDDIELAASPSYQLTTYRQPMQQLIAD 312

Query: 310 SVKIIVDQITTRNQSLVKLMVPTKLIQRKSTLK 342
            +  +        Q L       +LI R+S LK
Sbjct: 313 GIHCLTQAFEPGGQRL----YTGELIVRQSHLK 341