Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., Ribose operon repressor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  131 bits (329), Expect = 3e-35
 Identities = 96/307 (31%), Positives = 153/307 (49%), Gaps = 7/307 (2%)

Query: 18  KDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKLIGL 77
           KDVA+LAGVS STVS V      VSE   +KV  A K LNY P+A ARSL  N+++ IG+
Sbjct: 2   KDVARLAGVSTSTVSHVINKDRFVSETITEKVEAAIKSLNYAPSALARSLKLNQTRTIGM 61

Query: 78  VFPDADYPIHMKTLQLISSELQQVGYSAVLIPWQVDEQD-NHSIPNIFQYRVDGVIAASA 136
           +   +  P + + ++ +     + GYS VL   + DEQ  N ++  + Q RVDG++    
Sbjct: 62  LITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLCT 121

Query: 137 TFNKTLYEECEEF-NIPIVQYA-RVVEGTKSSYVISDN-YEAGRQAAQLLHQAGAQSAVY 193
             ++   E  E + +IP V       +G   S +I DN    G  A Q L   G      
Sbjct: 122 ETHQPSREIMERYPSIPTVMMDWSPFDGEGDSDLIQDNSLLGGDLATQYLIDKGFTRIAC 181

Query: 194 LTGEVPTFTNDERQQGFCSEFKSLTGFTPPVVKAT--YDYTGSLDTIRRLIADSSRPAAI 251
           +TG +       R +G+ +  K      P   + T  +++ G  D ++ L+A   RP A+
Sbjct: 182 ITGPLDKTPARLRLEGYRAAMKRAGLAIPQGYEITGDFEFGGGFDAMQALLAHQQRPQAV 241

Query: 252 FCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRLARESV 311
           F   D +A+     A ++  LRIP D+ VIG+D+I    +++  LTT  Q    L   ++
Sbjct: 242 FTGNDAMAVGAYQ-ALYQAGLRIPQDMVVIGYDDIELARYMTPPLTTIHQPKDELGELAI 300

Query: 312 KIIVDQI 318
            +++ ++
Sbjct: 301 DVLIHRM 307