Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 346 a.a., DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

 Score =  110 bits (275), Expect = 5e-29
 Identities = 91/308 (29%), Positives = 149/308 (48%), Gaps = 16/308 (5%)

Query: 15  VTSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKL 74
           +T +DVA+ AGVS +TVSRV    + VS  T++ V +A   L+YRPNA A++L T  S  
Sbjct: 2   ITIRDVARQAGVSVATVSRVLNNSTLVSADTREAVMKAVSELDYRPNANAQALATQVSDT 61

Query: 75  IGLV---FPDADYPIHMKTLQLISSELQQVGYSAVLIPWQVDEQDNHSIPNIFQYRVDGV 131
           IG+V     DA +   +K + L++ + Q+  Y  +   +   E++ H+I  + + R + +
Sbjct: 62  IGVVVMDVSDAFFGALVKAVDLVAQQHQK--YVLIGNSYHEAEKERHAIEVLIRQRCNAL 119

Query: 132 IAASATFNKTLYEECEEF--NIP-IVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGA 188
           I  S   +    +E  +F  NIP +V   RVV G     V  DN    R A ++L   G 
Sbjct: 120 IVHSKALSD---DELAQFMDNIPGMVLINRVVPGYAHRCVCLDNLSGARMATRMLLNNGH 176

Query: 189 QSAVYLTGEVPTFTNDERQQGFCSEFKSLTGFTPP---VVKATYDYTGSLDTIRRLIADS 245
           Q   YL+       +  R+ G+ S  K      PP   +   T D  G    +  L+  +
Sbjct: 177 QRIGYLSSSHGIEDDAMRKAGWMSALKE-QDIIPPESWIGAGTPDMPGGEAAMVELLGRN 235

Query: 246 SRPAAIFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKR 305
            +  A+F   DN+A   +   + +  + IP  + +IGFD+IP   +   QLTT       
Sbjct: 236 LQLTAVFAYNDNMAAGALTALK-DNGIAIPLHLSIIGFDDIPIARYTDPQLTTVRYPIAS 294

Query: 306 LARESVKI 313
           +A+ + ++
Sbjct: 295 MAKLATEL 302