Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., LacI family DNA-binding transcriptional regulator from Dickeya dianthicola ME23

 Score =  110 bits (275), Expect = 5e-29
 Identities = 97/341 (28%), Positives = 156/341 (45%), Gaps = 30/341 (8%)

Query: 15  VTSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKL 74
           VT  DVA  AGVS  TVSRV      VS +T+ KV +A   L+Y PN  A+ L  + +  
Sbjct: 6   VTLNDVAAYAGVSYQTVSRVLNQAPHVSHRTRGKVEQAMAALHYIPNRVAQQLARHSATT 65

Query: 75  IGLVFPDADYPIHMKTLQLISSELQQVGYSAVLIPWQVDEQDN--HSIPNIFQYRVDGVI 132
           +GL   D       +    I +   ++G++ V+   +  + ++   ++  +   RVDGVI
Sbjct: 66  LGLATIDLSLHAPSQIAAAIKTTASELGFNVVISMLRAADGNDVQRAVNELLAQRVDGVI 125

Query: 133 AASATFNKTLYEECEEFNIPIVQYARVVEGTKSSY-----------VISDNYEAGRQAAQ 181
                 N  L +E  E      Q  ++   T + +           VI D ++  + A  
Sbjct: 126 V-----NVPLEQEAAE------QIHQLCGATPALFLDTSPTADLPSVIFDPHQGAKLAID 174

Query: 182 LLHQAGAQSAVYLTGEVPTFTNDERQQGFCSEFKSLTGFTPPVVKATYDYTGS--LDTIR 239
            L   G +    L G   + +   R +G+     +      P   A  D++ S       
Sbjct: 175 HLVTLGHRRIALLAGPQSSVSARLRYEGWQQALAA--HLLTPCATAEGDWSASAGYQQAH 232

Query: 240 RLIADSSRPAAIFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTF 299
            L+A+S RP AI  A D +A+ V+  A  E+ LR+P+ I VIGFD+   + +    LTT 
Sbjct: 233 LLLANSLRPTAIAVANDQMALGVLR-AIHEYGLRVPEQISVIGFDDTRDSAYFQPPLTTI 291

Query: 300 AQDFKRLARESVKIIVDQITTRNQSLVKLMVPTKLIQRKST 340
            QDF++L RESV  +++ +   +     L + T LI R++T
Sbjct: 292 RQDFRQLGRESVNRLLECLQHPHPP-APLRLKTTLIPRQTT 331