Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., LacI family DNA-binding transcriptional regulator from Dickeya dadantii 3937

 Score =  114 bits (285), Expect = 4e-30
 Identities = 99/340 (29%), Positives = 152/340 (44%), Gaps = 26/340 (7%)

Query: 15  VTSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKL 74
           VT  DVA  AGVS  TVSRV      VS++T++KV +A   L+Y PN  A+ L    +  
Sbjct: 6   VTLNDVAAYAGVSYQTVSRVLNQAPHVSDRTREKVEQAMAALHYIPNRVAQQLARRSATT 65

Query: 75  IGLVFPDADYPIHMKTLQLISSELQQVGYSAVL-IPWQVDEQD-NHSIPNIFQYRVDGVI 132
           IGL   D       +    I     ++G++ V+ +   VD  D   ++  +   RVDGVI
Sbjct: 66  IGLATIDLSLHAPSQIAAAIKITASELGFNVVISMLRSVDGNDVQRAVNELLAQRVDGVI 125

Query: 133 AASATFNKTLYEECEEFNIPIVQYARVVEGTKSSY-----------VISDNYEAGRQAAQ 181
                 N  L +E  E      Q  R+   T + +           VI D ++  R A  
Sbjct: 126 -----INVPLEQEAAE------QIHRLCAATPALFLDTAPTADLPSVIFDPHQGTRLAID 174

Query: 182 LLHQAGAQSAVYLTGEVPTFTNDERQQGFCSEFKSLTGFTPPVVKATYDYTGSLDTIRRL 241
            L   G +    L G     +   R +G+     +         +  +  +        L
Sbjct: 175 HLVALGHRRIALLAGPQSAVSARLRYEGWQQALAAHQLTPCATAEGDWSASAGYQQAHLL 234

Query: 242 IADSSRPAAIFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQ 301
           +A+S RP AI  A D +A+ V+  A  E+ LR+P+ I VIGFD+   + +    LTT  Q
Sbjct: 235 LANSVRPTAIAVANDQMALGVLR-AIHEYGLRVPEQISVIGFDDTRDSAYFQPPLTTIRQ 293

Query: 302 DFKRLARESVKIIVDQI-TTRNQSLVKLMVPTKLIQRKST 340
           DF +L RESV  +++ + +    +   L + T LI R++T
Sbjct: 294 DFGQLGRESVNRLLECLQSPHKHAPAPLRLKTTLIPRQTT 333