Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., sugar-binding domain protein from Bacteroides ovatus ATCC 8483

 Score =  126 bits (317), Expect = 8e-34
 Identities = 88/328 (26%), Positives = 163/328 (49%), Gaps = 11/328 (3%)

Query: 19  DVAKLAGVSQSTVSRVFVPGSS---VSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKLI 75
           DV+K  G S ST+SRV    S    +S+  K+ + ++ K L+Y+P+  A+SL  N +  I
Sbjct: 41  DVSKKTGYSISTISRVLNGKSEKYRISQSAKEVILQSVKELDYQPDIVAQSLRNNTTYTI 100

Query: 76  GLVFPDADYPIHMKTLQLISSELQQVGYSAVLIPWQVDE-QDNHSIPNIFQYRVDGVIAA 134
           GL+ P  D P       ++  E Q+  Y+ +LI    D  Q+N +I ++   ++DG+I  
Sbjct: 101 GLLVPHIDNPFFANIASVVIREAQRYNYTVMLIDTLEDPIQENKAIDSLLSRKIDGIILV 160

Query: 135 SATFNKTLYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGAQSAVYL 194
               N +  EE      PIV   R  E     YV +DNY    QA +LL ++G    + +
Sbjct: 161 PTGENPSKLEEIST-KTPIVLIDRYFEKHNLPYVATDNYVGAYQATKLLLESGHSKILCI 219

Query: 195 TGEVPTFTNDERQQGFCSEFKSLTGFTPPVVKATYDYT---GSLDTIRRLIADSSRPAAI 251
            G   + T  ER +G+    +   G+    +    +++   G ++T +  +  +++P AI
Sbjct: 220 QGPDISITTKERVRGYLDALRE-AGYQDNAMIRGNEFSIQNGYIET-KLALNSTTKPTAI 277

Query: 252 FCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRLARESV 311
           F  +  + +  +  A  E  +RIP D+ +I FD+    ++L+  +T  AQ  + +   +V
Sbjct: 278 FALSSTILLGAVK-ALNEHKVRIPQDMSIISFDDNLYLDYLNPPITRIAQSLENIGIIAV 336

Query: 312 KIIVDQITTRNQSLVKLMVPTKLIQRKS 339
           K+++ +I    +   ++++   +I+R S
Sbjct: 337 KMLMQKILEETELHSEILLKPNIIKRDS 364