Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., putative HTH-type transcriptional repressor ExuR from Azospirillum sp. SherDot2

 Score =  142 bits (357), Expect = 2e-38
 Identities = 87/289 (30%), Positives = 147/289 (50%), Gaps = 8/289 (2%)

Query: 12  KATVTSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNE 71
           K+ VT++ VA +AGVS+S VSR F  G  VSE+T++++  A++ L YRPN  ARSLT   
Sbjct: 2   KSRVTAQQVADMAGVSRSAVSRCFGDGL-VSEETRKRIMAASEALGYRPNVIARSLTGQN 60

Query: 72  SKLIGLVFPDADYPIHMKTLQLISSELQQVGYSAVLIPWQVDEQDNHSIPNIFQYRVDGV 131
           + L+ L+  + + P     L+ +   + +    A++IP         S  +   Y+VD +
Sbjct: 61  TGLVALLLAELENPHTDLVLKKLLVAIAEADRRALVIPETRQHDLTSSTMHALDYQVDAI 120

Query: 132 IAASATFNKTLYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGAQSA 191
           +    T +  + +     + P+ Q+ R +EG     V  DN   G    + L Q+G +  
Sbjct: 121 VVMGGTVSDHVVDRLRALDTPVFQFGRQIEGLGG--VACDNRLGGLMGGRFLVQSGRRRI 178

Query: 192 VYLTGEVPTFTNDERQQGFCSEFKSLTGFTPPVVKATYD--YTGSLDTIRRLIADSSRPA 249
            Y+T    T  N  R+ G  +  +      P + + + D  + G  +   RL A S RP 
Sbjct: 179 AYVTKTAQTDANRRRRAGLAAALED--AGLPFMEEESEDNSFEGGYNAATRLFARSDRPD 236

Query: 250 AIFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTT 298
           A+FC  D +A+  +  A   F LR+P+D+ ++GFD+IP   W ++ L++
Sbjct: 237 ALFCFNDIIALGALQAAA-TFRLRVPEDVAILGFDDIPMASWPAFGLSS 284