Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., Galactose operon repressor from Alteromonas macleodii MIT1002

 Score =  117 bits (294), Expect = 3e-31
 Identities = 89/331 (26%), Positives = 156/331 (47%), Gaps = 7/331 (2%)

Query: 16  TSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKLI 75
           T   VA+ AGVS STVSRV    +SV++  K++V +A K LNYRPN+ ARSL  N +  +
Sbjct: 3   TIYQVAERAGVSLSTVSRVLNGKASVNKVLKERVEKAVKELNYRPNSVARSLANNRTDSV 62

Query: 76  GLVFPDADYPIHMKTLQLISSELQQVGYSAVL-IPWQVDEQDNHSIPNIFQYRVDGVIAA 134
           G++ P+ + P     +Q + S L+      ++ +     E +  ++  +     D +I  
Sbjct: 63  GVLVPELNAPFFGDLMQAVESTLRAADKHVIISVGRNCLETEKDAVEFLISRNCDALIMH 122

Query: 135 SATFNKTLYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGAQSAVYL 194
           +   +     E  +  +P+    R VEG   +    DN + G  A + L + G +   Y+
Sbjct: 123 AEALSDEYLLELNQSKLPVALVNRQVEGLPEACTSLDNEKGGYLATRHLLELGHKDIAYI 182

Query: 195 TGEVPTFTNDERQQGFCSEFKSLTGFTPPVVKATYDYT---GSLDTIRRLIADSSRPAAI 251
           +G         R +G           T P +    DY+   G +  +  L+A      A+
Sbjct: 183 SGPTDKCDASLRLEGHKRALSEAGLPTNPQLIFNGDYSEEDGKIGLL-ELMARDVPFTAL 241

Query: 252 FCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRLARESV 311
            CA D +A   +  AR +  + +P D+ V+GFD++     +  +LTT +     +A  S 
Sbjct: 242 VCANDWMASGAISCAR-DLGMSLPHDLSVVGFDDVVFAHHVFPRLTTVSNPIAEMAEMSA 300

Query: 312 KIIVDQITTRNQSLVKLMVPTKLIQRKSTLK 342
           K I++++  +  + V+L     L+ R+ST+K
Sbjct: 301 KYILNKVYGQANN-VQLYFEPSLVVRESTVK 330