Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., Galactose operon repressor from Alteromonas macleodii MIT1002

 Score =  108 bits (269), Expect = 3e-28
 Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 8/288 (2%)

Query: 16  TSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKLI 75
           T   V++ AGVS +TVSRV    + VSE+T++KV +A   L Y+PNA A+SL +N +  +
Sbjct: 3   TIYQVSEAAGVSLATVSRVMNGNAKVSERTRKKVEDAMASLGYQPNAIAQSLASNRTNSV 62

Query: 76  GLVFPDADYPIHMKTLQLISSELQQVGYSAVLIPWQVDEQDNH-SIPNIFQYRVDGVIAA 134
           GL+  +         +  +   L+Q G   ++    VDE+  H +I  +   R D +I  
Sbjct: 63  GLLVSELHGSYFGDLMSTVEHVLKQNGKHVIITAGHVDEKREHEAIEFLKSRRCDALILH 122

Query: 135 SATFNKTLYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGAQSAVYL 194
           +   +    +   +  IP+V   R V+    +  + DN   G  A +    AG +   Y+
Sbjct: 123 AEAVSDDYLKTLVDSKIPVVVINRKVDALDENCFVVDNERGGYMATKAAIDAGHKKIAYI 182

Query: 195 TGEVPTFTND--ERQQGF--CSEFKSLTGFTPPVVKATYDYTGSLDTIRRLIADSSRPAA 250
           +G  P F  D  +R  G     +   +T     V +  +  +   + ++ L    S   A
Sbjct: 183 SG--PLFKKDASDRLAGHKRALQEAGVTFRENSVFEGDFHESSGQEGMQHLQRTFSDFTA 240

Query: 251 IFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTT 298
           + CA D +A   M  AR E    IP  + +IGFDN+  + +L  +LTT
Sbjct: 241 LVCANDEMASGAMTAAR-EAGFDIPSQLSIIGFDNVLFSRYLYPKLTT 287