Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., LacI family transcriptional regulator from Agrobacterium fabrum C58

 Score =  110 bits (275), Expect = 5e-29
 Identities = 89/325 (27%), Positives = 149/325 (45%), Gaps = 6/325 (1%)

Query: 18  KDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKLIGL 77
           ++VA LAGVS +TVSR       V  +T++KVF+A +  N+ PNA A S     +  + L
Sbjct: 10  REVAALAGVSIATVSRALQQPDKVRPETRKKVFDAVRQANFVPNAQAASFRRQSNNTVIL 69

Query: 78  VFPDADYPIHMKTLQLISSELQQVGYSAVLIPWQVDEQDNHS-IPNIFQYRVDGVIAASA 136
           +  D   P +++  + +     + G+  ++   + DE    + I  + Q   DG+I  + 
Sbjct: 70  LVRDIGNPFYLEIYKGVEEAAGEAGFKVLMGDARNDEHRVATHIDMVRQKHADGLILMTG 129

Query: 137 TFNKTLYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGAQSAVYLTG 196
            F   L ++ +    PIV  +  V G     V  DN  A   A + L  AG Q  V+L G
Sbjct: 130 QFPSELLDQADALP-PIVIASETVPGLALPTVKVDNRAASMNAMRHLIAAGHQRIVHLAG 188

Query: 197 EVPTFTNDERQQGFCSEF--KSLTGFTPPVVKATYDYTGSLDTIRRLIADSSRPAAIFCA 254
            VP     ER  G+ +      +      VV   Y        I  L+       AIF +
Sbjct: 189 PVPESLAQERFDGYRAALAEAGIAYADELVVTGDYSIEAGRQAIAGLLEGGIAFTAIFAS 248

Query: 255 TDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRLARESVKII 314
           +D +A+  +   R    L +P D+ VIGFD+I         LTT  Q  + + R ++ ++
Sbjct: 249 SDQMAIGAISELRGR-GLSVPADVSVIGFDDIIFANAFEPPLTTVRQPRQEMGRRAMALM 307

Query: 315 VDQITTRNQSLVKLMVPTKLIQRKS 339
           VD++  + ++   +++ T+L+ R S
Sbjct: 308 VDRLNGK-RTAETIVLDTELVVRGS 331