Pairwise Alignments

Query, 431 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., benzoate MFS transporter from Pseudomonas putida KT2440

 Score = 67.8 bits (164), Expect = 6e-16
 Identities = 98/406 (24%), Positives = 163/406 (40%), Gaps = 48/406 (11%)

Query: 12  MIQRVAAYLAILVGYFFYCYNFVIIDYVRPYIVEAYEGISLSDTAQFYTWQSVGALIGAL 71
           M+      L I  GY  + Y  V+     P I++ + G++        ++   G + GAL
Sbjct: 21  MVMAWCGLLLIFDGYDLFIYGVVL-----PVIMKEW-GLTPLQAGALGSYALFGMMFGAL 74

Query: 72  SCAWFAGRFGKKYTLITITALNGGATIVNMMFTDYATWAAMRFIIGLSLGGYFTVAVSLM 131
           +    A R G+K  +    AL  GATI+N   ++ + +   RFI GL  GG    AV+LM
Sbjct: 75  AFGSLADRIGRKKGIAICFALFSGATILNGFASNPSEFGIYRFIAGLGCGGLMPNAVALM 134

Query: 132 IGLFTPTVRGKLTAFASSMFSVALMVMGAYAAFISSIDAPWESLMWVGGIPPLAAAFAMV 191
                  +R  L A   S +S+  M+      F+      WES+ +   +P L     + 
Sbjct: 135 NEYAPKRLRSTLVAIMFSGYSLGGMLSAGVGIFMLP-RFGWESMFFAAAVPLLLLPVILY 193

Query: 192 FVLPSDKNVIAYG--EE------------DSSANTGQNTPAKKGSWGEMLSKPYRLLTIT 237
           ++  S   ++  G  EE            D  A+       +KGS   +L      L I 
Sbjct: 194 YLPESIGFLVRQGRIEEARTLLKRLDPDCDVQADDVLQAADRKGSGASVLELFRNGLAIR 253

Query: 238 CLLLAGLNFYGFQFFSGFVTTYLKEVRQFDGATIGVIFSISA---FGSLFGAWVWGAVAD 294
            L L  + F+        ++++L ++    G ++G   S      FG + GA + G + D
Sbjct: 254 TLAL-WVAFFCCLLMVYALSSWLPKLMANAGYSLGSSLSFLLALNFGGMAGAILGGWLGD 312

Query: 295 KFGR-KVNAFGFILAGIMAS-------------IFFIAPSDLMIGSLNMLAILGLIYNFG 340
           ++   KV    FI A +  S             + FIA +  +     +L   G    +G
Sbjct: 313 RYNLVKVKVAFFIAAALSISLLGVNSPMPVLYLLIFIAGATTI--GTQILLYAGAAQMYG 370

Query: 341 LSSSAVWGGYFSELFPAHLRSYGAAL--FHGGRIIGMWAPMVLIFI 384
           LS  +   G+ S      +   GA +    GG ++G+  P+ L FI
Sbjct: 371 LSVRSTGLGWAS-----GIGRNGAIVGPLLGGALMGINLPLQLNFI 411



 Score = 45.1 bits (105), Expect = 4e-09
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 11/148 (7%)

Query: 272 GVIFSISAFGSLFGAWVWGAVADKFGRKVN---AFGFILAGIMASIFFIAPSDLMIGSLN 328
           G + S + FG +FGA  +G++AD+ GRK      F       + + F   PS+   G   
Sbjct: 59  GALGSYALFGMMFGALAFGSLADRIGRKKGIAICFALFSGATILNGFASNPSEF--GIYR 116

Query: 329 MLAILGLIYNFGLSSSAVWGGYFSELFPAHLRS-YGAALFHGGRIIGMWAPMVLIFIKER 387
            +A LG     GL  +AV     +E  P  LRS   A +F G  + GM +  V IF+  R
Sbjct: 117 FIAGLGC---GGLMPNAV--ALMNEYAPKRLRSTLVAIMFSGYSLGGMLSAGVGIFMLPR 171

Query: 388 TDLQTAMWGSPIVWIVAGLLWLSLPETL 415
              ++  + + +  ++  ++   LPE++
Sbjct: 172 FGWESMFFAAAVPLLLLPVILYYLPESI 199