Pairwise Alignments

Query, 431 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., Putative metabolite transport protein YdjK from Escherichia coli ECRC62

 Score = 55.1 bits (131), Expect = 5e-12
 Identities = 87/364 (23%), Positives = 152/364 (41%), Gaps = 53/364 (14%)

Query: 53  SDTAQFYTWQSVGALIGALSCAWFAGRFGKKYTLITITALNGGATIVNMMFTDYATWAAM 112
           S TA F    + G  +GAL       + G++   I   A++  + +V     +     A 
Sbjct: 58  STTATFSAITTAGMFLGALVGGIIGDKTGRRNAFILYEAIHIASMVVGAFSPNMDFLIAC 117

Query: 113 RFIIGLSLGGYFTVAVSLMIGLFTPTVRGKLTAFASSMFSV---------ALMVMGAYAA 163
           RF++G+ LG    + V+L  G FT  + G+     SS  S          +L+ MG    
Sbjct: 118 RFVMGVGLGA---LLVTLFAG-FTEYMPGRNRGTWSSRVSFIGNWSYPLCSLIAMGLTP- 172

Query: 164 FISSIDAPWESLMWVGGIPPL-AAAFAMVFVLPSDKNVIAYG------------EEDSSA 210
            + S +  W   + +  I  L A A A  +   S + + + G            EE    
Sbjct: 173 -LISAEWNWRVQLLIPAILSLIATALAWRYFPESPRWLESRGRYQEAEKVMRSIEEGVIR 231

Query: 211 NTGQNTP----AKKGSWGEMLSKPY----------RLLTITCLLLAGLNFYGFQFFSGFV 256
            TG+  P    A  G   + +  PY          R++  +C+L+A +N   +   +   
Sbjct: 232 QTGKPLPPVVIADDGKAPQAV--PYSALLTGVLLKRVILGSCVLIA-MNVVQYTLINWLP 288

Query: 257 TTYLKEVRQFDGATIGVIFSISAFGSLFGAWVWGAVADKFGRKVNAFG-FILAGIMASIF 315
           T ++ +      +   V+ ++S FG+ FG ++   V DK  RK    G  IL  ++  I+
Sbjct: 289 TIFMTQGINLKDSI--VLNTMSMFGAPFGIFIAMLVMDKIPRKTMGVGLLILIAVLGYIY 346

Query: 316 FIAPSDLMIGSLNMLAILGLIYNFGLSSSAVWGGYFSELFPAHLRSYGAALFHG-GRIIG 374
            +  S L+I  +    ++  +Y +   +SAV   Y  E++P   +  G+ L +  GRI G
Sbjct: 347 SLQTSMLLITLIGFF-LITFVYMYVCYASAV---YVPEIWPTEAKLRGSGLANAVGRISG 402

Query: 375 MWAP 378
           + AP
Sbjct: 403 IAAP 406



 Score = 37.4 bits (85), Expect = 1e-06
 Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 8/157 (5%)

Query: 254 GFVTTYLKEVRQFDGATIGVIFSISAFGSLFGAWVWGAVADKFGRKVNAFGFILAGIMAS 313
           G +   LK +   D +T     +I+  G   GA V G + DK GR+ NAF    A  +AS
Sbjct: 43  GLILAQLKALGWTDNSTTATFSAITTAGMFLGALVGGIIGDKTGRR-NAFILYEAIHIAS 101

Query: 314 IFFIAPSDLMIGSLNMLAILGLIYNFGLSSSAVWGGYFSELFPAHLRSYGAALFHGGRII 373
           +   A S  M   +    ++G+    G     ++ G F+E  P   R   ++       I
Sbjct: 102 MVVGAFSPNMDFLIACRFVMGV--GLGALLVTLFAG-FTEYMPGRNRGTWSSRV---SFI 155

Query: 374 GMWA-PMVLIFIKERTDLQTAMWGSPIVWIVAGLLWL 409
           G W+ P+  +     T L +A W   +  ++  +L L
Sbjct: 156 GNWSYPLCSLIAMGLTPLISAEWNWRVQLLIPAILSL 192